Pairwise Alignments

Query, 381 a.a., molecular chaperone DnaJ from Vibrio cholerae E7946 ATCC 55056

Subject, 316 a.a., Chaperone protein DnaJ from Xanthobacter sp. DMC5

 Score =  168 bits (426), Expect = 2e-46
 Identities = 125/366 (34%), Positives = 171/366 (46%), Gaps = 62/366 (16%)

Query: 4   RDFYEVLGVGRDASERDIKKAYKRLAMKYHPDRNSGDAGAAEKFKEVKEAYEILTDAQKK 63
           RD Y+VLG+ + A E +IK+AY++LA K HPD N+ D  A ++F E+  A+EIL+D +K+
Sbjct: 2   RDPYDVLGISKTADEAEIKRAYRKLAKKLHPDANASDPKAQDRFAELNTAHEILSDKEKR 61

Query: 64  AAYDQYGHAAFEQGAG----GFGGGGFGGGGADFGDIFGDVFGDIFGGGRRGGGPRAQRG 119
             YD+    A  +       GFGGGG   G   F    GD   + F  G  G   R  RG
Sbjct: 62  GQYDRGEIDAEGKPRAPEFTGFGGGGPRRGPGGFSGFDGDTIFESFSFGPEGAR-RTSRG 120

Query: 120 SDLRYNMELSLEEAVRGCSKEIEVPTLVHCDACDGSGAKKGTSAQTCGTCHGHG-QVQMR 178
                                                   G   +  G   G G Q +  
Sbjct: 121 G---------------------------------------GGGFEDIGDIFGFGRQRRSA 141

Query: 179 QGFFAVQQTCPTCHGKGKIIKDPCNVCHG-QGRKQKT-----KTLNVKIPAGVDTGDRIR 232
            G FA Q       G    I  P +     QG  ++      K +++KI  G   G R+R
Sbjct: 142 GGGFAPQP------GADMEITLPISFEEATQGASKRVGLPNGKQIDIKIAPGTREGHRMR 195

Query: 233 LSGEGEAGEMGAPAGDLYVQVHVKEHHIFERDGNNLYCEVPVSFAMAALGGEVEVPTLDG 292
           L G+GE   MG PAGD YV +    H +FERDG++L   + V  A A LG +V VPTL G
Sbjct: 196 LKGQGEPSPMGGPAGDAYVTISYATHPLFERDGDDLRQSLDVPLADAVLGAKVRVPTLTG 255

Query: 293 RVSLKVPAETQTGRMFRMRGKGVKGVRSAALGDLIVKLVVETPVNLSARQKELLKEFEES 352
            V L +PA T  GR FR+RGKG+    +   GDL+ ++ V  P   SA  +EL+++ +  
Sbjct: 256 AVELAIPAWTSGGRTFRLRGKGLPNA-TGGHGDLLARVNVVLPAEKSAELEELMRKLK-- 312

Query: 353 CGGEAA 358
             GEAA
Sbjct: 313 --GEAA 316