Pairwise Alignments

Query, 381 a.a., molecular chaperone DnaJ from Vibrio cholerae E7946 ATCC 55056

Subject, 314 a.a., DnaJ domain-containing protein from Pseudomonas fluorescens SBW25

 Score =  168 bits (426), Expect = 2e-46
 Identities = 125/363 (34%), Positives = 172/363 (47%), Gaps = 73/363 (20%)

Query: 1   MSKRDFYEVLGVGRDASERDIKKAYKRLAMKYHPDRNSGDAGAAEKFKEVKEAYEILTDA 60
           M  +D+Y++LGV   A +++IK AY++LA KYHPD  S +  A  KFK+  EAYE L  A
Sbjct: 1   MDFKDYYKILGVEPTADDKEIKAAYRKLARKYHPD-VSKEKDAEAKFKDASEAYEALKSA 59

Query: 61  QKKAAYDQ---YG-HAAFEQGAGGF---GGGGFGGGGADFGDIFGDVF---GDIFGGGRR 110
            K+A YD+   YG H    QG  G+   GG G GGGG DF D F  +F   GD FGGG+R
Sbjct: 60  DKRAEYDELRKYGQHGQPFQGPPGWQSRGGYGGGGGGEDFSDFFSSIFGSRGDAFGGGQR 119

Query: 111 GGGPRAQRGSDLRYNMELSLEEAVRGCSKEI--EVPTLVHCDACDGSGAKKGTSAQTCGT 168
              P  ++G D+   + + LEE +   SK+I  +VP        D SG     + ++   
Sbjct: 120 --RPAGRKGQDVEMQLSVFLEETLSTESKQISFQVPQY------DASGRHVSNTTKSLN- 170

Query: 169 CHGHGQVQMRQGFFAVQQTCPTCHGKGKIIKDPCNVCHGQGRKQKTKTLNVKIPAGVDTG 228
                                        +K P  V                       G
Sbjct: 171 -----------------------------VKIPAGVA---------------------DG 180

Query: 229 DRIRLSGEGEAGEMGAPAGDLYVQVHVKEHHIFERDGNNLYCEVPVSFAMAALGGEVEVP 288
           +RIRL G+G  G  G   GDLY+ +    H  FE DG NL   +P++    ALG EV VP
Sbjct: 181 ERIRLKGQGAPGIGGGANGDLYLIIKFAPHPKFEVDGENLIINLPLAPWELALGTEVAVP 240

Query: 289 TLDGRVSLKVPAETQTGRMFRMRGKGVKGVRSAALGDLIVKLVVETPVNLSARQKELLKE 348
           TL G+++LKVPA +Q G+  R +G G+   ++   G L V+L    P N     K L +E
Sbjct: 241 TLTGKINLKVPAGSQNGQRMRAKGHGLLN-KAGQRGYLFVQLKAVMPKNTDDEVKALWQE 299

Query: 349 FEE 351
             +
Sbjct: 300 LAQ 302