Pairwise Alignments

Query, 381 a.a., molecular chaperone DnaJ from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., molecular chaperone DnaJ from Magnetospirillum magneticum AMB-1

 Score =  123 bits (308), Expect = 8e-33
 Identities = 99/341 (29%), Positives = 152/341 (44%), Gaps = 58/341 (17%)

Query: 4   RDFYEVLGVGRDASERDIKKAYKRLAMKYHPDRNSGDAGAAEKFKEVKEAYEILTDAQKK 63
           +D Y VLGV R AS+ DIKKAY+ LA + HPD N GDA A  +FK++             
Sbjct: 2   KDPYLVLGVARTASDDDIKKAYRALARELHPDLNPGDAKAESRFKDIS------------ 49

Query: 64  AAYDQYGHAAFEQGAGGFGGGGFGGGGADFGDIFGDVFGDIFGGGRRGGGPRAQRGSDLR 123
           AAYD    +        F  G     G+     +    G   G G  GGGPR   G    
Sbjct: 50  AAYDFLSDSTKR---AQFDAGEIDATGSPKRGAWRSRPGARPGPG--GGGPRGGFGG-FG 103

Query: 124 YNMELSLEEAVRGCSKEIEVPTLVHCDACDGSGAKKGTSAQTC--GTCHGHGQVQMRQGF 181
            N++  + E  R   ++ +  +  H  A    G  + T   +       G  +V +  G 
Sbjct: 104 ENVDDIMAELFR---RKQKAQSQAHAKARPRGGDVRHTLTISFLDAAAGGTKRVTLMSG- 159

Query: 182 FAVQQTCPTCHGKGKIIKDPCNVCHGQGRKQKTKTLNVKIPAGVDTGDRIRLSGEGEAGE 241
                                            +T+ V+IP G   G  +RL G+G   +
Sbjct: 160 ---------------------------------RTVEVRIPPGSQDGQTLRLKGQGHGAD 186

Query: 242 MGAPAGDLYVQVHVKEHHIFERDGNNLYCEVPVSFAMAALGGEVEVPTLDGRVSLKVPAE 301
            GA  GD ++++ V++H  F+R   ++  ++PV+   A LGG+V VPT+DG+V + +P  
Sbjct: 187 DGAVPGDAFIEIKVEDHSHFKRRDLDVLLDLPVTVQEAVLGGKVPVPTIDGKVMVTIPPG 246

Query: 302 TQTGRMFRMRGKGVKGVRSAALGDLIVKLVVETPVNLSARQ 342
           + TG + R++G+G+ G  +   GD +V L V  P +   RQ
Sbjct: 247 SNTGAVLRLKGRGIAGPGNTR-GDQLVTLTVVLPEDGEFRQ 286



 Score = 42.0 bits (97), Expect = 2e-08
 Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 1/83 (1%)

Query: 265 GNNLYCEVPVSFAMAALGGEVEVPTLDGR-VSLKVPAETQTGRMFRMRGKGVKGVRSAAL 323
           G ++   + +SF  AA GG   V  + GR V +++P  +Q G+  R++G+G      A  
Sbjct: 132 GGDVRHTLTISFLDAAAGGTKRVTLMSGRTVEVRIPPGSQDGQTLRLKGQGHGADDGAVP 191

Query: 324 GDLIVKLVVETPVNLSARQKELL 346
           GD  +++ VE   +   R  ++L
Sbjct: 192 GDAFIEIKVEDHSHFKRRDLDVL 214