Pairwise Alignments

Query, 381 a.a., molecular chaperone DnaJ from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., DnaJ-class molecular chaperone CbpA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  152 bits (385), Expect = 9e-42
 Identities = 112/336 (33%), Positives = 158/336 (47%), Gaps = 65/336 (19%)

Query: 1   MSKRDFYEVLGVGRDASERDIKKAYKRLAMKYHPDRNSGDAGAAEKFKEVKEAYEILTDA 60
           M  +D+Y ++GV      + IK AY+RLA KYHPD  S +  A  +FKEV EA+E+L+D 
Sbjct: 1   MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDV-SKEPDAEARFKEVAEAWEVLSDE 59

Query: 61  QKKAAYDQ-YGHAAFEQGAGGFGGG-GFGGGGADFGDIFGDVFGDIFGGGRRGGGPRAQR 118
           Q++A YDQ + H    Q    F    G      DF DIF  +FG     GR      A R
Sbjct: 60  QRRAEYDQLWQHRNDPQFNRQFQQHEGQPYNAEDFDDIFSSIFGQ---HGRHSHHRHAAR 116

Query: 119 GSDLRYNMELSLEEAVRGCSKEIEVPTLVHCDACDGSGAKKGTSAQTCGTCHGHGQVQMR 178
           G D+   + + LEE +    + I     V+                              
Sbjct: 117 GHDIEIEVAVFLEETLEEHQRTISYSVPVY------------------------------ 146

Query: 179 QGFFAVQQTCPTCHGKGKIIKDPCNVCHGQGRKQKTKTLNVKIPAGVDTGDRIRLSGEGE 238
             F  V++  P                         KTLNVKIPAGV  G RIRL G+G 
Sbjct: 147 NAFGLVEREIP-------------------------KTLNVKIPAGVSNGQRIRLKGQGT 181

Query: 239 AGEMGAPAGDLYVQVHVKEHHIFERDGNNLYCEVPVSFAMAALGGEVEVPTLDGRVSLKV 298
            GE G P GDL++ +H+  H +F+    +L   +P++   AALG +V VPTL  R+ L +
Sbjct: 182 PGENGGPNGDLWLVIHIAPHPLFDIVNQDLEVVLPLAPWEAALGAKVSVPTLKERILLTI 241

Query: 299 PAETQTGRMFRMRGKGVKGVRSAALGDL--IVKLVV 332
           P  +Q G+  R++GKG+   +    GDL  I+K+V+
Sbjct: 242 PPGSQAGQRLRIKGKGLASKKHT--GDLYAIIKIVM 275