Pairwise Alignments

Query, 381 a.a., molecular chaperone DnaJ from Vibrio cholerae E7946 ATCC 55056

Subject, 317 a.a., Curved DNA-binding protein from Acinetobacter radioresistens SK82

 Score =  152 bits (383), Expect = 2e-41
 Identities = 116/383 (30%), Positives = 181/383 (47%), Gaps = 88/383 (22%)

Query: 3   KRDFYEVLGVGRDASERDIKKAYKRLAMKYHPDRNSGDAGAAEKFKEVKEAYEILTDAQK 62
           ++++YE LG+ RDAS  +IKK+Y++LA KYHPD  S +A A  + + +  AY+ L+D +K
Sbjct: 2   EKNYYEQLGISRDASPEEIKKSYRKLARKYHPD-VSKEADAEAQMQAINVAYDTLSDPEK 60

Query: 63  KAAYDQ-----YGHAAFEQ--GAGGFGGG-----GFGGGGAD----FGDIFGDVFGDIFG 106
           KA YDQ      G + F Q  G GGF G      GF  G A     F D+FG  FG  FG
Sbjct: 61  KAEYDQMLDHPQGFSGFNQNAGQGGFDGSRFYRQGFSQGDASDFNGFEDLFGR-FGTGFG 119

Query: 107 GG--RRGGGPRAQRGSDLRYNMELSLEEAVRGCSKEI--EVPTLVHCDACDGSGAKKGTS 162
           GG  +    PR+ RG D    +E+ +E   +G ++ I  ++PT+                
Sbjct: 120 GGHYQYQREPRSYRGEDQHAKIEIDVEVGYQGATQNITLQIPTV---------------- 163

Query: 163 AQTCGTCHGHGQVQMRQGFFAVQQTCPTCHGKGKIIKDPCNVCHGQGRKQKTKTLNVKIP 222
                  +G  +VQ                                      KTL VKIP
Sbjct: 164 -----NAYGEPEVQ-------------------------------------RKTLQVKIP 181

Query: 223 AGVDTGDRIRLSGEGEAGEMGAPAGDLYVQVHVKEHHIFERDGNNLYCEVPVSFAMAALG 282
            G+  G +IRLSG+G+ G  G   GDLY+++  ++      DG ++Y  + V+   AALG
Sbjct: 182 KGMKEGQQIRLSGQGQLGINGGENGDLYIEIQYRDTDRIRVDGTDVYYTINVTPWEAALG 241

Query: 283 GEVEVPTLDGRVSLKVPAETQTGRMFRMRGKGVKGVRSAALGDLIVKLVVETPVNLSARQ 342
             + V T  G +++ +P   Q+G+  R++ KG+    +   G L + L +  P   +A+Q
Sbjct: 242 KAITVNTPAGSLNVNLPKNAQSGQQLRLKDKGIP---NKTPGHLYLILNIVVPPATTAQQ 298

Query: 343 KELLKEFEESCGGEAATKHKPKA 365
           ++  +        EA   ++P+A
Sbjct: 299 QQAYESL-----AEAFVSYQPRA 316