Pairwise Alignments

Query, 635 a.a., molecular chaperone DnaK from Vibrio cholerae E7946 ATCC 55056

Subject, 621 a.a., Chaperone protein HscA from Variovorax sp. SCN45

 Score =  394 bits (1011), Expect = e-114
 Identities = 242/617 (39%), Positives = 366/617 (59%), Gaps = 30/617 (4%)

Query: 5   IGIDLGTTNSCVAVLDGDKPRVIENAEGERTTPSVIAYTDGETL-VGQPAKRQAVTNPQN 63
           +GIDLGTT+S VA +       + + +G    PS + Y +G+   +G  A      +P N
Sbjct: 22  VGIDLGTTHSLVASVRNGVAECLPDDQGRVLLPSAVRYLEGDRRQIGFDAVAARAQDPAN 81

Query: 64  TLFAIKRLIGRRFEDEEVQRDIKIMPYKIVKADNGDAWVEAKGQKMAAPQVSAEVLKKMK 123
           T+ ++KRL+GR   D    RD   M Y I  +D G   V+    + +  ++SAE+L  ++
Sbjct: 82  TITSVKRLMGRGLADI-ANRDA--MSYSIGSSDGGMVNVQTLAGEKSPVEISAEILATLR 138

Query: 124 KTAED-FLGEPVTAAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDK 182
             A+D F  + +  AVITVPAYF++ QRQATKDA ++AGL V R+I+EPTAAA+AYGLD 
Sbjct: 139 YRAQDTFDDDELYGAVITVPAYFDEGQRQATKDAAQLAGLNVLRLISEPTAAAIAYGLDN 198

Query: 183 QGGDRTIAVYDLGGGTFDISIIEIDEVEGEKTFEVLSTNGDTHLGGEDFDNRMINYLVDE 242
              +   AVYDLGGGTFDISI+ + +      FEV++T GD+ LGG+D+D+ + ++++ +
Sbjct: 199 -ASEGVYAVYDLGGGTFDISILRLTQ----GVFEVIATGGDSALGGDDYDHALADFVLAQ 253

Query: 243 FKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRA 302
                G D     L +     AA  AK  L+ +  T       +A+  G    N  ++R 
Sbjct: 254 TGLQAGSDADKAALLV-----AARAAKEALTDSASTT-----FSANVAGTV-ANFDLSRE 302

Query: 303 KLEALVEDLVQRSLEPLKVALADADLSVNDITDVILVGGQTRMPMVQKKVAEFFGKEPRK 362
           +     + L  R++  ++ AL DA L  +++  ++LVGG TRMP V++ VA+FFG+EP  
Sbjct: 303 QFYTATQPLTDRTIAAVRKALRDAKLKPDELQGIVLVGGSTRMPQVRRAVADFFGREPLV 362

Query: 363 DVNPDEAVAVGAAVQGGVLAGE--VKDVLLLDVTPLSLGIETMGGVMTKLIEKNTTIPTK 420
           ++NPDE VA+GAA+Q   LAG     ++LLLDV PLSLGIETMGG++ +++ +N TIPT 
Sbjct: 363 NLNPDEVVALGAAIQANQLAGNNGAGELLLLDVIPLSLGIETMGGLVERIVPRNQTIPTA 422

Query: 421 ANQVFSTAEDNQSAVTIHVLQGERKQAMYNKSLGQFNLEGINPAPRGMPQIEVIFDLDAD 480
             Q F+T +D Q+A+ +HV+QGER      +SL +F L GI P   G  +I V F +DAD
Sbjct: 423 MAQDFTTYQDGQTALALHVVQGERDLVSDCRSLARFTLRGIPPMAAGAARIRVTFTVDAD 482

Query: 481 GILHVSAKDKQTGKEQKITIQASGGLSDAEIEKMVQEAEANKEADKKFEELATARNQADQ 540
           G+L VSAK++ +G E  + ++ S GLSD +I  M+QE+ +  + D +   L  AR  AD+
Sbjct: 483 GLLSVSAKEQGSGVEASVAVKPSYGLSDDQIATMLQESFSTAQQDMQARALVEARVDADR 542

Query: 541 MIHATRKQITEAGEALPADEKAKIETAINELETAKKGEDKAEIDAKVQALMAAAQKLMEI 600
           M+ AT+  +   G+ L  +E+  I+ ++ +L  A K  + A       A+ AA +KL + 
Sbjct: 543 MLLATQSALDADGDLLSDEERTLIDASMAQLREAAKTSNDA------GAIEAATKKLADD 596

Query: 601 AQQQAQAQGANAGQSSA 617
            +  A AQ  NAG + A
Sbjct: 597 TEAFA-AQRMNAGIARA 612