Pairwise Alignments

Query, 635 a.a., molecular chaperone DnaK from Vibrio cholerae E7946 ATCC 55056

Subject, 616 a.a., Chaperone protein HscA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  418 bits (1075), Expect = e-121
 Identities = 246/601 (40%), Positives = 360/601 (59%), Gaps = 26/601 (4%)

Query: 6   GIDLGTTNSCVAVLDGDKPRVIENAEGERTTPSVIAYTDGETLVGQPAKRQAVTNPQNTL 65
           GIDLGTTNS VA +   +   + + EG    PSV+ Y      VG  A+  A  +  NT+
Sbjct: 23  GIDLGTTNSLVATVRSGQAETLPDHEGRHLLPSVVHYQQQGHTVGYAARDNAAQDTANTI 82

Query: 66  FAIKRLIGRRFEDEEVQRDIKIMPYKIVKADNGDAWVEAKGQKMAAPQVSAEVLKKMKKT 125
            ++KR++GR   D  +Q     +PY+   + NG   ++     +   +VSA++LK +   
Sbjct: 83  SSVKRMMGRSLAD--IQTRYPHLPYRFKASVNGLPMIDTAAGLLNPVRVSADILKALAAR 140

Query: 126 AEDFLGEPVTAAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKQGG 185
           A + L   +   VITVPAYF+DAQRQ TKDA R+AGL V R++NEPTAAA+AYGLD  G 
Sbjct: 141 ASESLSGELDGVVITVPAYFDDAQRQGTKDAARLAGLHVLRLLNEPTAAAIAYGLDS-GK 199

Query: 186 DRTIAVYDLGGGTFDISIIEIDEVEGEKTFEVLSTNGDTHLGGEDFDNRMINYLVDEFKK 245
           +  IAVYDLGGGTFDISI+ +        FEVL+T GD+ LGG+DFD+ + +Y+    ++
Sbjct: 200 EGVIAVYDLGGGTFDISILRLSR----GVFEVLATGGDSALGGDDFDHLLADYI----RE 251

Query: 246 DQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLE 305
             GI  R+D    + L +AA  AKI LS A    VN+    A   G      ++TR +  
Sbjct: 252 QAGIADRSDNRVQRELLDAAIAAKIALSDADTVRVNV----AGWQG------EITREQFN 301

Query: 306 ALVEDLVQRSLEPLKVALADADLSVNDITDVILVGGQTRMPMVQKKVAEFFGKEPRKDVN 365
            L+  LV+R+L   + AL DA +   D+ +V++VGG TR+P+V+++V EFFG+ P   ++
Sbjct: 302 DLISALVKRTLLACRRALKDAGVEPQDVLEVVMVGGSTRVPLVRERVGEFFGRTPLTAID 361

Query: 366 PDEAVAVGAAVQGGVLAGEVKD--VLLLDVTPLSLGIETMGGVMTKLIEKNTTIPTKANQ 423
           PD+ VA+GAA+Q  +L G   D  +LLLDV PLSLG+ETMGG++ K+I +NTTIP    Q
Sbjct: 362 PDKVVAIGAAIQADILVGNKPDSEMLLLDVIPLSLGLETMGGLVEKVIPRNTTIPVARAQ 421

Query: 424 VFSTAEDNQSAVTIHVLQGERKQAMYNKSLGQFNLEGINPAPRGMPQIEVIFDLDADGIL 483
            F+T +D Q+A++IHV+QGER+     +SL +F L GI P P G   I V F +DADG+L
Sbjct: 422 DFTTFKDGQTAMSIHVMQGERELVQDCRSLARFALRGIPPLPAGGAHIRVTFQVDADGLL 481

Query: 484 HVSAKDKQTGKEQKITIQASGGLSDAEIEKMVQEAEANKEADKKFEELATARNQADQMIH 543
            V+A +K TG E  I ++ S GL+D EI  M++++ +  E D K   LA  + +A +++ 
Sbjct: 482 SVTAMEKSTGVEASIQVKPSYGLTDGEIASMIKDSMSFAEQDVKARMLAEQKVEAARVLE 541

Query: 544 ATRKQITEAGEALPADEKAKIETAINELETAKKGEDKAEIDAKVQALMAAAQKLMEIAQQ 603
           +    +T     L A E+  I+ A   L    +G+D   +DA  QA+    ++  E A +
Sbjct: 542 SLTGALTADAALLSAAERQCIDDAAAHLSAVAQGDD---VDAIEQAIKNVDKQTQEFAAR 598

Query: 604 Q 604
           +
Sbjct: 599 R 599