Pairwise Alignments

Query, 635 a.a., molecular chaperone DnaK from Vibrio cholerae E7946 ATCC 55056

Subject, 556 a.a., molecular chaperone HscC from Escherichia coli ECRC100

 Score =  259 bits (661), Expect = 3e-73
 Identities = 190/593 (32%), Positives = 297/593 (50%), Gaps = 72/593 (12%)

Query: 5   IGIDLGTTNSCVAVLDGDKPRVIENAEGERTTPSVIAYTDGE-TLVGQPAKRQAVTNPQN 63
           IGIDLGTTNS +AV      ++I N  GE  TPS+I+  +    LVG+PA  +  ++P  
Sbjct: 8   IGIDLGTTNSLIAVWKDGAAQLIPNKFGEYLTPSIISMDENNHILVGKPAVSRRTSHPDK 67

Query: 64  TLFAIKRLIGRRFEDEEVQRDIKIMPYKIVKADNGDAWVEAKGQKMAAPQVSAEVLKKMK 123
           T    KR +G                       +   W         AP++S+ VL+ +K
Sbjct: 68  TAALFKRAMG-----------------------SNTNW-RLGSDTFNAPELSSLVLRSLK 103

Query: 124 KTAEDFLGEPVTAAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKQ 183
           + AE+FL  P+   VI+VPAYF+D QR+ T+ A  +AGL   R+INEPTAAA+AYGL  Q
Sbjct: 104 EDAEEFLQRPIKDVVISVPAYFSDEQRKHTRLAAELAGLNAVRLINEPTAAAMAYGLHTQ 163

Query: 184 GGDRTIAVYDLGGGTFDISIIEIDEVEGEKTFEVLSTNGDTHLGGEDFDNRMINYLVDEF 243
              R++ V+DLGGGTFD++++E          EV ++ GD  LGGEDF     + LVDE 
Sbjct: 164 QNTRSL-VFDLGGGTFDVTVLEY----ATPVIEVHASAGDNFLGGEDF----THMLVDEV 214

Query: 244 KKDQGI---DLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVT 300
            K   +    L    LA   L    E AK     + Q+ +++ +   D T       +  
Sbjct: 215 LKRADVARTTLNESELA--ALYACVEAAK----CSNQSPIHIRWQYQDET----RECEFY 264

Query: 301 RAKLEALVEDLVQRSLEPLKVALADADLSVNDITDVILVGGQTRMPMVQKKVAEFFGKEP 360
             +LE L   L+ R   P++ AL DA L  + I  ++LVGG ++MP+VQ+     FGK P
Sbjct: 265 ENELEDLWLPLLNRLRVPIEQALRDARLKPSQIDSLVLVGGASQMPLVQRIAVRLFGKLP 324

Query: 361 RKDVNPDEAVAVGAAVQGG--VLAGEVKDVLLLDVTPLSLGIET----MGGVMTKLIEKN 414
            +  +P   VA+GAA+Q    + + ++++V+L D+ P SLG+E     + G+ + +IE+N
Sbjct: 325 YQSYDPSTIVALGAAIQAACRLRSEDIEEVILTDICPYSLGVEVNRQGVSGIFSPIIERN 384

Query: 415 TTIPTKANQVFSTAEDNQSAVTIHVLQGERKQAMYNKSLGQFNLEGINPAPR--GMPQIE 472
           TT+P    + +ST    Q ++T++V QGE  +   N  +  F++    P  R      I+
Sbjct: 385 TTVPVSRVETYSTMHPEQDSITVNVYQGENHKVKNNILVESFDV----PLKRTGAYQSID 440

Query: 473 VIFDLDADGILHVSAKDKQTGKEQKITIQASGGLSDAEIEKMVQEAEANKEADKKFEELA 532
           + F  D +G+L V    +    + ++   +   LS  +IE+      A K   +      
Sbjct: 441 IRFSYDINGLLEVDVLLEDGSVKSRVINHSPVTLSAQQIEESRTRLSALKIYPR------ 494

Query: 533 TARNQADQMIHATRK-QITEAGEALPADEKAKIETAINELETAKKGEDKAEID 584
                 D +I+ T K ++ E       DE+ +I   I + + A +  D A +D
Sbjct: 495 ------DMLINRTFKAKLEELWARALGDEREEIGRVITDFDAALQSNDMARVD 541