Pairwise Alignments

Query, 635 a.a., molecular chaperone DnaK from Vibrio cholerae E7946 ATCC 55056

Subject, 556 a.a., Hsp70 family chaperone Hsc62; RpoD-binding transcription inhibitor from Escherichia coli BL21

 Score =  254 bits (650), Expect = 5e-72
 Identities = 185/590 (31%), Positives = 290/590 (49%), Gaps = 66/590 (11%)

Query: 5   IGIDLGTTNSCVAVLDGDKPRVIENAEGERTTPSVIAYTDGE-TLVGQPAKRQAVTNPQN 63
           IGIDLGTTNS +AV      ++I N  GE  TPS+I+  +    LVG+PA  +  ++P  
Sbjct: 8   IGIDLGTTNSLIAVWKDGAAQLIPNKFGEYLTPSIISMDENNHILVGKPAVSRRTSHPDK 67

Query: 64  TLFAIKRLIGRRFEDEEVQRDIKIMPYKIVKADNGDAWVEAKGQKMAAPQVSAEVLKKMK 123
           T    KR +G                       +   W         AP++S+ VL+ +K
Sbjct: 68  TAALFKRAMG-----------------------SNTNW-RLGSDTFNAPELSSLVLRSLK 103

Query: 124 KTAEDFLGEPVTAAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKQ 183
           + AE+FL  P+   VI+VPAYF+D QR+ T+ A  +AGL   R+INEPTAAA+AYGL  Q
Sbjct: 104 EDAEEFLQRPIKDVVISVPAYFSDEQRKHTRLAAELAGLNAVRLINEPTAAAMAYGLHTQ 163

Query: 184 GGDRTIAVYDLGGGTFDISIIEIDEVEGEKTFEVLSTNGDTHLGGEDFDNRMINYLVDEF 243
              R++ V+DLGGGTFD++++E          EV ++ GD  LGGEDF     + LVDE 
Sbjct: 164 QNTRSL-VFDLGGGTFDVTVLEY----ATPVIEVHASAGDNFLGGEDF----THMLVDEV 214

Query: 244 KKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAK 303
                  L+   +A   L E+   A      A +     P         +         +
Sbjct: 215 -------LKRADVARTTLNESELAALYACVEAAKCSNQSPMHIRWQYQDEARECDFYENE 267

Query: 304 LEALVEDLVQRSLEPLKVALADADLSVNDITDVILVGGQTRMPMVQKKVAEFFGKEPRKD 363
           LE L   L+ R   P++ AL DA L  + I  ++LVGG ++MP+VQ+     FGK P + 
Sbjct: 268 LEDLWLPLLNRLRVPIEQALRDARLKPSQIDSLVLVGGASQMPLVQRIAVRLFGKLPYQS 327

Query: 364 VNPDEAVAVGAAVQGG--VLAGEVKDVLLLDVTPLSLGIET----MGGVMTKLIEKNTTI 417
            +P   VA+GAA+Q    + + ++++V+L D+ P SLG+E     + G+ + +IE+NTT+
Sbjct: 328 YDPSTIVALGAAIQAACRLRSEDIEEVILTDICPYSLGVEVNRQGVSGIFSPIIERNTTV 387

Query: 418 PTKANQVFSTAEDNQSAVTIHVLQGERKQAMYNKSLGQFNLEGINPAPR--GMPQIEVIF 475
           P    + +ST    Q ++T++V QGE  +   N  +  F++    P  +      I++ F
Sbjct: 388 PVSRVETYSTMHPEQDSITVNVYQGENHKVKNNILVESFDV----PLKKTGAYQSIDIRF 443

Query: 476 DLDADGILHVSAKDKQTGKEQKITIQASGGLSDAEIEKMVQEAEANKEADKKFEELATAR 535
             D +G+L V    +    + ++   +   LS  +IE+      A K   +         
Sbjct: 444 SYDINGLLEVDVLLEDGSVKSRVINHSPVTLSAQQIEESRTRLSALKIYPR--------- 494

Query: 536 NQADQMIHATRK-QITEAGEALPADEKAKIETAINELETAKKGEDKAEID 584
              D +I+ T K ++ E       DE+ +I   I + + A +  D A +D
Sbjct: 495 ---DMLINRTFKAKLEELWARALGDEREEIGRVITDFDAALQSNDMARVD 541