Pairwise Alignments

Query, 554 a.a., DNA repair protein RecN from Vibrio cholerae E7946 ATCC 55056

Subject, 557 a.a., DNA repair protein RecN from Rhodanobacter sp000427505 FW510-R12

 Score =  390 bits (1002), Expect = e-113
 Identities = 226/552 (40%), Positives = 321/552 (58%), Gaps = 2/552 (0%)

Query: 1   MLAHLSINNFAIVKSLQLELSKGMTTITGETGAGKSIAIDALGLCLGGRAEASMVRQGED 60
           ML  L + +FA+V++ ++    G+T ++GETGAGKS+ +DAL L  G RA++ MVR G D
Sbjct: 1   MLTSLYVRHFAVVEAAEVAFGPGLTVVSGETGAGKSLLVDALMLLAGARADSGMVRAGSD 60

Query: 61  KTEVSAAFHLDNNLLASRWLEDNELLEGKECILRRIITKDGRSKAFINGSPVPLSQLKTL 120
           + E++A F L     A  WL+  EL E   C LRR+I  +G SKA+ING P    QL  L
Sbjct: 61  RAELAAEFDLAELPAARDWLQREELDEDGGCQLRRVIRAEGSSKAWINGRPANARQLGEL 120

Query: 121 GQLLINVHGQHAHQQLMKPEYQLSMLDQYAGHADLLKATRHAYQNWRQASNQLKQLRENS 180
             LL+ +HGQH HQ L+   +QL++LD YAGH +LL   R     WR+   ++++L    
Sbjct: 121 AALLVEIHGQHEHQALLSRPHQLALLDAYAGHDELLAQVRGNAVRWRELGTRMRKLSGGD 180

Query: 181 QQNQAQLQLLEYQIKELNELALGEDEFVELEQEQKRLANSGDLALNCQRAIELLNEGEEV 240
            ++Q +++LL ++I EL + AL   E  ELE + KRLAN+G LA      +ELL+   E 
Sbjct: 181 DRDQ-RIELLRHEIGELEKWALPAAELAELETQHKRLANAGRLAEGTAGVVELLDGDSEF 239

Query: 241 NALGLLQSVSHTLIDLAEMDSKLTALPSMVAEALIQLEETYHELRNYLDSIDVDPERMAY 300
                L      L  LA +D +L  L  ++  A IQL E    L  Y   +D+DPER   
Sbjct: 240 ALRRALGRAQAELGKLAALDERLNPLLELLDNAGIQLGEAADGLARYAQDVDLDPERFTE 299

Query: 301 VEERYSKVMSLARKHHVLPEELYQHHQALLQQIAQLDCSDEKMSALASEVDVLYQTFVAA 360
           V+   +++  L+R+H +   EL+     L  ++A+L+ + + +  L ++ + L   +  A
Sbjct: 300 VDNHLARLHELSRRHRLPAAELHDRLAVLQAELAELEGAGDVLEQLMAQRERLRGDYTHA 359

Query: 361 ADKLHKSRVRYAKELDKLISQSMHELSMEKAQFKIEVQQDSA-HSSPLGFDAVTFLVSTN 419
           A KL ++R   A  L   +S  M EL M     ++E++  S     P G +    LVS N
Sbjct: 360 AAKLSEARAAAAARLGDEVSVLMGELGMVGGLLRVELEPSSGDEPDPQGGERCELLVSAN 419

Query: 420 PGQPLQPIAKVASGGELSRMSLAIQVITAQKVDTPSLIFDEVDVGISGPTAAVVGKLLRK 479
           PGQP +P+ KVASGGEL+R+SLAI+V+T  K    S+IFDEVD GI G  A VVG+ LR 
Sbjct: 420 PGQPPRPLRKVASGGELARISLAIEVVTLGKDTVGSMIFDEVDSGIGGAVAEVVGQKLRA 479

Query: 480 LGESTQVLCVTHLPQVAGCGHHQLFVAKQTKAGKTETQMLKLDQEQRIAELARLLGGSQI 539
           LG   QVLCVTHLPQVA  GH  L V+K +    T TQ+  LD   R  ELAR+LGG +I
Sbjct: 480 LGAQRQVLCVTHLPQVAAQGHAHLKVSKHSDGDSTHTQIEALDAAGRRDELARMLGGLEI 539

Query: 540 TESTLANAKELL 551
           T  T A+A+++L
Sbjct: 540 TRETRAHARQML 551