Pairwise Alignments

Query, 554 a.a., DNA repair protein RecN from Vibrio cholerae E7946 ATCC 55056

Subject, 560 a.a., DNA repair protein RecN from Variovorax sp. SCN45

 Score =  363 bits (931), Expect = e-104
 Identities = 215/557 (38%), Positives = 324/557 (58%), Gaps = 15/557 (2%)

Query: 2   LAHLSINNFAIVKSLQLELSKGMTTITGETGAGKSIAIDALGLCLGGRAEASMVRQGEDK 61
           L  +++ +F IV+SL+L+LS G T +TGETGAGKSI IDAL L LG RA+A  VR+G ++
Sbjct: 3   LRRIALRDFVIVRSLELDLSGGFTVLTGETGAGKSILIDALQLALGNRADAGAVREGAER 62

Query: 62  TEVSAAFHLDNNLLASRWLEDNELLEGKECILRRIITKDGRSKAFINGSPVPLSQLKTLG 121
            +VSA F  D  L  + WL++     G   +LRR +   GRS+ +INGSP   +QL+ LG
Sbjct: 63  LDVSAEFDADPAL--ATWLDEGGFEAGDALLLRRTVDLQGRSRGWINGSPATATQLRELG 120

Query: 122 QLLINVHGQHAHQQLMKPEYQLSMLDQYAG-HADLLKATRHAYQNWRQASNQLKQLRENS 180
             L+++HGQHA Q L +P+    +LD YAG   D L A   A+Q WRQA + L+  R   
Sbjct: 121 DRLLDIHGQHAWQSLTRPDAVRGLLDAYAGVRTDALDA---AWQGWRQALSALEHARSAQ 177

Query: 181 QQNQAQLQLLEYQIKELNELALGEDEFVELEQEQKRLANSGDLALNCQRAIELLNEGEEV 240
              Q + + L++QI E+ +LA G DE+ EL     R++N+  L    Q A + L E E+ 
Sbjct: 178 DSLQRERERLQWQISEVAKLAPGADEWEELSTNHSRISNAQALIDAAQGASQAL-EDEDN 236

Query: 241 NALGLLQSVSHTLIDLAEMDSKLTALPSMVAEALIQLEETYHELRNYLDSIDVDPERMAY 300
            AL  L   +  L +   ++ +   L  ++A  + Q  +  H L  YL   + DP+ +A 
Sbjct: 237 GALSALSRAAALLKNCEHIEPEFRNLGEVLASCVAQASDAAHSLHGYLRDAEADPQSLAE 296

Query: 301 VEERYSKVMSLARKHHVLPEELYQHHQALLQQIAQLDCSDEKMSALASEVDVLYQTFVAA 360
           ++ER    MSLAR++   P EL         ++  LD   + +  L        Q ++  
Sbjct: 297 LDERMGLWMSLARRYKRTPAELPALLAGWQSELQALDAQSD-LDGLERAEQSAQQAYMKE 355

Query: 361 ADKLHKSRVRYAKELDKLISQSMHELSMEKAQFKIEVQQDSAHSSPLGFDAVTFLVSTNP 420
           A  L KSR + A  L + ++++M  L M+  +F++++Q   A     G + + FLV+ + 
Sbjct: 356 AKALGKSRKQAAPRLAQAVTEAMQGLGMKGGRFEVDLQP-LAQPGRAGLEEIAFLVAGHT 414

Query: 421 GQPLQPIAKVASGGELSRMSLAIQVITAQKVDTPSLIFDEVDVGISGPTAAVVGKLLRKL 480
           G   + I KVASGGELSR++LAI V T+Q     +LIFDEVD G+ G  A  VG+L+++L
Sbjct: 415 GSTPRAIGKVASGGELSRIALAIAVTTSQLGAAQTLIFDEVDAGVGGAVAETVGRLMKQL 474

Query: 481 GESTQVLCVTHLPQVAGCGHHQLFVAKQTKAG------KTETQMLKLDQEQRIAELARLL 534
           G   QVL VTHLPQVA C  H L VAK+  A       +TE+ + +LD++ R  E+AR+L
Sbjct: 475 GRDRQVLAVTHLPQVAACADHHLVVAKRQTAAAGKEGPRTESGVSRLDEDNRAKEIARML 534

Query: 535 GGSQITESTLANAKELL 551
           GG ++++++LA+A+E+L
Sbjct: 535 GGEKVSQTSLAHAREML 551