Pairwise Alignments

Query, 554 a.a., DNA repair protein RecN from Vibrio cholerae E7946 ATCC 55056

Subject, 540 a.a., DNA repair protein RecN from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  347 bits (889), Expect = e-100
 Identities = 210/550 (38%), Positives = 319/550 (58%), Gaps = 13/550 (2%)

Query: 7   INNFAIVKSLQLELSKGMTTITGETGAGKSIAIDALGLCLGGRAEASMVRQGEDKTEVSA 66
           + +F IV+SL+LEL  G   +TGETGAGKSI IDAL L LG R+++ +VR+G  + +++A
Sbjct: 1   LRDFVIVQSLELELGSGFGVLTGETGAGKSILIDALQLALGSRSDSGVVREGAARCDIAA 60

Query: 67  AFHLDNNLLASRWLEDNELLEGKECILRRIITKDGRSKAFINGSPVPLSQLKTLGQLLIN 126
            F    +L  + WLE+         +LRR +  +GRS+A+INGS   ++QLK L   L++
Sbjct: 61  EFDAPASL--TPWLEEQGFPVEDGLLLRRTVDTEGRSRAWINGSAATVTQLKALADGLVD 118

Query: 127 VHGQHAHQQLMKPEYQLSMLDQYAGHADLLKATRHAYQNWRQASNQLKQLRENSQQNQAQ 186
           +HGQHA Q L + E    +LD YAG  D   A R A+  WRQ    L    E     Q +
Sbjct: 119 IHGQHAWQSLTRAEAVRDLLDAYAG-IDTAPAAR-AWAQWRQRRKALDSATEKQNSLQQE 176

Query: 187 LQLLEYQIKELNELALGEDEFVELEQEQKRLANSGDLALNCQRAIELLNEGEEVNALGLL 246
            + L +QI EL++L+    E+ EL  +  RLAN+  L    Q A   L+E ++ NA  L+
Sbjct: 177 SERLAWQIAELDKLSPQAGEWEELNTQHSRLANAQGLLDAAQIAANALDE-DDTNAAALI 235

Query: 247 QSVSHTLIDLAEMDSKLTALPSMVAEALIQLEETYHELRNYLDSIDVDPERMAYVEERYS 306
                 L   A ++ +  +    +  AL Q+++T H L  Y    + DP  +  +++R S
Sbjct: 236 HRALSALQAQAHIEPQFASAIEALEAALAQVQDTVHSLHQYSRHTERDPGSLEALDQRLS 295

Query: 307 KVMSLARKHHVLPEELYQHHQALLQQIAQLDCSDEKMSALASEVDVLYQTFVAAADKLHK 366
             +SLAR++   PEEL + H     ++AQ+D + + + AL       ++TF  A   + K
Sbjct: 296 LWVSLARRYRRTPEELAEVHAQWKTELAQIDQALD-LEALQRAERADWKTFATALQAISK 354

Query: 367 SRVRYAKELDKLISQSMHELSMEKAQFKIEV---QQDSAHSSPLGFDAVTFLVSTNPGQP 423
            R + A +L K ++ +M  L M+   F++ +   ++  AH    G + V F V+ + G  
Sbjct: 355 ERQKAAPKLSKAVTATMQTLGMQGGVFEVALLPLEEPQAH----GAEQVEFRVAGHAGAT 410

Query: 424 LQPIAKVASGGELSRMSLAIQVITAQKVDTPSLIFDEVDVGISGPTAAVVGKLLRKLGES 483
            +P+ KVASGGELSR++LAI V+T++    P+LIFDEVD GI G  A  VG+LLR+LG+ 
Sbjct: 411 PKPVGKVASGGELSRIALAISVVTSRLGQAPTLIFDEVDSGIGGAVAHTVGQLLRQLGKD 470

Query: 484 TQVLCVTHLPQVAGCGHHQLFVAKQTKAGKTETQMLKLDQEQRIAELARLLGGSQITEST 543
            QVL VTHLPQVA C  H L V+KQ    +T++ +  +  + R+ ELAR+LGG + +E +
Sbjct: 471 RQVLAVTHLPQVAACADHHLLVSKQAVGRQTQSTVEPIATDARVRELARMLGGGEQSEIS 530

Query: 544 LANAKELLIA 553
           LA+A+E+L A
Sbjct: 531 LAHAREMLAA 540