Pairwise Alignments

Query, 136 a.a., outer membrane protein assembly factor BamE from Vibrio cholerae E7946 ATCC 55056

Subject, 113 a.a., small membrane protein A (VIMSS) from Escherichia coli BW25113

 Score = 86.3 bits (212), Expect = 1e-22
 Identities = 40/96 (41%), Positives = 61/96 (63%), Gaps = 2/96 (2%)

Query: 26  ALPLAVTALSGCSLLERLVYRIDINQGNYVDQQSVDQLKFGMSKDQVRFVLGSPMLVENG 85
           A+ L +TA  GCS LER+VYR DINQGNY+    V +++ GM++ QV + LG+P++ +  
Sbjct: 11  AVLLMLTA--GCSTLERVVYRPDINQGNYLTANDVSKIRVGMTQQQVAYALGTPLMSDPF 68

Query: 86  YPDTWYYIYHHTQGHNDPVQKNLIVKFNDGGKLVNV 121
             +TW+Y++    GH    Q+ L + FN  G L N+
Sbjct: 69  GTNTWFYVFRQQPGHEGVTQQTLTLTFNSSGVLTNI 104