Pairwise Alignments

Query, 136 a.a., outer membrane protein assembly factor BamE from Vibrio cholerae E7946 ATCC 55056

Subject, 112 a.a., Small protein A (tmRNA-binding) from Enterobacter asburiae PDN3

 Score = 87.4 bits (215), Expect = 6e-23
 Identities = 40/96 (41%), Positives = 62/96 (64%), Gaps = 2/96 (2%)

Query: 26  ALPLAVTALSGCSLLERLVYRIDINQGNYVDQQSVDQLKFGMSKDQVRFVLGSPMLVENG 85
           A+ L +TA  GCS LE++VYR DINQGNY+    V +++ GM++ QV + LG+PM+ +  
Sbjct: 11  AVLLMLTA--GCSTLEKVVYRPDINQGNYLTPNDVSKIRVGMTQQQVAYTLGTPMMSDPF 68

Query: 86  YPDTWYYIYHHTQGHNDPVQKNLIVKFNDGGKLVNV 121
             +TW+Y++    GH D  Q+ L + F+  G L N+
Sbjct: 69  GTNTWFYVFRQKPGHEDATQQTLTLTFSSAGVLTNI 104