Pairwise Alignments

Query, 161 a.a., SsrA-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 164 a.a., tmRNA-binding protein SmpB from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  147 bits (372), Expect = 6e-41
 Identities = 71/160 (44%), Positives = 106/160 (66%)

Query: 2   TKKKTNTKAGSNTIALNKKARHEYFIEDEFEAGMELQGWEVKSLRQGKANIAESYVYIKD 61
           + K+++TK   + IA N+KA   Y IE+ FEAGM L+GWEVK+LR+GK  + + YV I++
Sbjct: 5   SSKESSTKGVDSRIAENRKALFNYAIEERFEAGMVLEGWEVKALREGKVQLTDGYVVIRE 64

Query: 62  GEAFISGMTIIPLQQASTHVVANPTRIRKLLLSRRELDNLFGRINREGMTLTALSLYWSR 121
           GE F+ G  I PL  ASTHV  +  R +KLLL + ++  L G++ ++G  L  L+L+W  
Sbjct: 65  GELFLIGCQINPLHTASTHVSPDAVRTKKLLLHKEQIRRLVGKVEQKGYALVPLNLHWKT 124

Query: 122 SWVKIKIGVAKGKKLHDKREDLKEKEWQRQKDRVMKSALR 161
             VK +I + KGK  HDKR+ +K++E +R+ +R MKS  R
Sbjct: 125 GKVKCEIALGKGKAEHDKRDTIKDREGKREVERAMKSRSR 164