Pairwise Alignments

Query, 161 a.a., SsrA-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 160 a.a., tmRNA-binding protein SmpB from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  231 bits (588), Expect = 6e-66
 Identities = 113/161 (70%), Positives = 133/161 (82%), Gaps = 1/161 (0%)

Query: 1   MTKKKTNTKAGSNTIALNKKARHEYFIEDEFEAGMELQGWEVKSLRQGKANIAESYVYIK 60
           MTKKK + K GS TIALNK+ARHEYFIE+EFEAG+ LQGWEVKSLR GKANI +SYV +K
Sbjct: 1   MTKKKAH-KPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANIGDSYVILK 59

Query: 61  DGEAFISGMTIIPLQQASTHVVANPTRIRKLLLSRRELDNLFGRINREGMTLTALSLYWS 120
           DGEA++ G    P+  ASTHVV +PTR RKLLL++RELD+L+GRINREG T+ ALSLYW 
Sbjct: 60  DGEAWLFGANFTPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRINREGYTVVALSLYWK 119

Query: 121 RSWVKIKIGVAKGKKLHDKREDLKEKEWQRQKDRVMKSALR 161
            +W K+KIGVAKGKK HDKR DLKE+EWQ  K R+MK+A R
Sbjct: 120 NAWCKVKIGVAKGKKQHDKRSDLKEREWQLDKARIMKNAGR 160