Pairwise Alignments

Query, 422 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 413 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

 Score =  449 bits (1156), Expect = e-131
 Identities = 219/410 (53%), Positives = 290/410 (70%)

Query: 1   MAKNTVKLTDKEIKASKPREKEYNLFDGDGLRLRIKPNGSKQWIFNYYRPTNGKRANLSF 60
           MAK  V LT+ ++K +K  +KEY L DGDGL+LR+K NG+K WI  Y  P   KR N+SF
Sbjct: 1   MAKRVVPLTNTQVKQAKESDKEYTLSDGDGLQLRVKTNGTKLWILKYTHPITKKRNNISF 60

Query: 61  GMYPDISLLQARKSLLSAKELIAQGIDPQDDRKRQQQVHKEIHEHTFENVTKDWFAIKQN 120
           G +PD+SL +ARK    AK L+A  IDP+  +  Q    +   E+TF   +  W  +K+ 
Sbjct: 61  GCFPDVSLAEARKRRSEAKTLLALNIDPKQHKDEQLLKERAELENTFGKYSDRWLTLKRE 120

Query: 121 DVTPDYALDIWRSLELHIFPHISDKPVKAITAPEIIELLKPIEAKGSLETVKRLTQRLNE 180
            V P+ A   +R+LE HI P + + P++ I    ++ +L+P++A+G+LETVKRL + +NE
Sbjct: 121 SVKPETADKAYRALEKHILPKLGNVPIQDIKPRTVLSILEPVKAQGTLETVKRLCRIINE 180

Query: 181 VMNFATNCGLIQANPLTGIKAAFKKPKKENMAALTPAELPELMSAIANASIKRTTRCLLE 240
           VM  A   G I+ N L  I   F  PK+++M  + P  LPELM AIANA+I   TRCLLE
Sbjct: 181 VMRLAVASGDIEVNYLADITKLFPAPKRQHMVTIEPERLPELMQAIANANITLATRCLLE 240

Query: 241 WQLHTMTRPAEASGARWDEINWEEKVWTIPAERMKKRREHRIPLTEQMLALLEVMKPISG 300
           WQLHTMTRP E++ ARW +I+++ KVW IPAERMK +R H IPLTEQ LALLE+MKPIS 
Sbjct: 241 WQLHTMTRPIESATARWQDIDFKNKVWVIPAERMKMKRPHTIPLTEQTLALLEIMKPISS 300

Query: 301 HRDFIFPSDRAPKKPCNSQTANMALKRMGFAGRLVSHGLRSLASTTLNEQGFDPDLVESA 360
           HR++IFPS++ PK   NSQ+ANMALKRMG+ G+LVSHGLR+LASTTLNEQGF+PD++E+A
Sbjct: 301 HREYIFPSNKNPKSHVNSQSANMALKRMGYKGQLVSHGLRALASTTLNEQGFNPDIIEAA 360

Query: 361 LAHVDDNQVRSAYNRTDYLERRKPMMCWWSEHIEEAARGSLSVTGTKQLK 410
           LAHVD N+VR AYNR +YLE+R+ +M WWS HI  A+  + S+   K LK
Sbjct: 361 LAHVDKNEVRKAYNRAEYLEQRRKLMSWWSSHITSASNCNTSLAERKVLK 410