Pairwise Alignments

Query, 422 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 412 a.a., DUF4102 domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  226 bits (576), Expect = 1e-63
 Identities = 132/399 (33%), Positives = 214/399 (53%), Gaps = 9/399 (2%)

Query: 8   LTDKEIKASKPREKEYNLFDGDGLRLRIKPNGSKQWIFNYYRPTNGKRANLSFGMYPDIS 67
           LTD +IKA+KP +K   L DG G+ L + P   + W   Y     GK   L+ G+YPD++
Sbjct: 3   LTDLQIKAAKPADKPIKLADGGGMFLLVTPQDQRYWRLKYR--FGGKEKLLALGVYPDVT 60

Query: 68  LLQARKSLLSAKELIAQGIDPQDDRKRQQQVHKEIHEHTFENVTKDWFAIKQNDVTPDYA 127
           +  AR+    AK+ +A GIDP D RK ++         +FENV ++WFA         ++
Sbjct: 61  IKTARQLRDDAKKQLANGIDPSDARKAKKSSQLLDGPDSFENVAREWFAKNVATWAETHS 120

Query: 128 LDIWRSLELHIFPHISDKPVKAITAPEIIELLKPIEAKGSLETVKRLTQRLNEVMNFATN 187
             + + LE  +FP I  KP+ +ITAP I+ + + IEA+G+ +T  R  Q   ++M +A  
Sbjct: 121 SKVLQRLESDVFPLIGTKPIGSITAPMILAVARKIEARGANDTAHRAVQNAGQIMRYAVA 180

Query: 188 CGLIQANPLTGIKAAFKKPKKENMAALT-PAELPELMSAIANASIKRTTRCLLEWQLHTM 246
            G  + +P   ++ A    + ++ AALT P  + EL+ A          +  L+      
Sbjct: 181 TGRAERDPTGDLRGALPPVRHKHFAALTDPKLVGELLRAFDAFEGTVVVKAALQLAPLVF 240

Query: 247 TRPAEASGARWDEINWEEKVWTIPAERMKKRR--EHRIPLTEQMLALLEVMKPISGHRDF 304
            RP E   A+W +I+ +   W   A + +K    EH +PL+ Q + +L  +   +G+R+ 
Sbjct: 241 VRPGELRKAKWADIDLDAGSWAFHASKARKGETIEHLVPLSTQAVEILRDLHQYTGNREC 300

Query: 305 IFPSDRAPKKPCNSQTANMALKRMGFAGR--LVSHGLRSLASTTLNEQ-GFDPDLVESAL 361
           +FP  R P+KP +    N AL+R+G+  +  +  HG R++A T L EQ G DP ++E  L
Sbjct: 301 LFPG-RDPRKPMSEAAVNAALRRLGYDTKTEITGHGFRAMARTILAEQLGEDPHVIEQQL 359

Query: 362 AHVDDNQVRSAYNRTDYLERRKPMMCWWSEHIEEAARGS 400
           AH   + +  AYNRT Y+E+R+ MM  WS++++    G+
Sbjct: 360 AHRVPDALGRAYNRTKYIEQRRAMMQRWSDYLDTLKAGA 398