Pairwise Alignments

Query, 422 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 427 a.a., integrase arm-type DNA-binding domain-containing protein from Dickeya dianthicola ME23

 Score =  233 bits (593), Expect = 1e-65
 Identities = 144/412 (34%), Positives = 208/412 (50%), Gaps = 24/412 (5%)

Query: 6   VKLTDKEIKASKPREKEYNLFDGDGLRLRIKPNGSKQWIFNYYRPTNGKRANLSFGMYPD 65
           + L D +I+  K   K + + D  GL L I P GS+ W   Y    N K + L  G YPD
Sbjct: 1   MSLNDSKIRNLKSLAKPFKVSDSHGLYLLINPGGSRLWYLKYR--INKKESRLGLGTYPD 58

Query: 66  ISLLQARKSLLSAKELIAQGIDPQDDRKRQQQVHKEIHEHTFENVTKDWFAIKQNDV-TP 124
           +SL  AR+     ++L+AQ I+P   R  ++       E TF+ V   W   K N   + 
Sbjct: 59  VSLADARQQRDGIRKLLAQNINPAQQRSAERTTSSP--EKTFKTVALSWH--KSNRTWSE 114

Query: 125 DYALDIWRSLELHIFPHISDKPVKAITAPEIIELLKPIEAKGSLETVKRLTQRLNEVMNF 184
           ++A  +  S+  HIFP I  +PV  +     IELLK IE KG LE   R  Q L  +M  
Sbjct: 115 NHATRLLASMNNHIFPVIGHQPVTELKPRHFIELLKGIEKKGLLEVAARTRQHLCNIMRH 174

Query: 185 ATNCGLIQANPLTGIKAAFKKPKKENMAALTPAELPELMSAIAN-ASIKRTTRCLLEWQL 243
           A +  LI+ NP   +      P K +  AL   +LPEL++ I      +  TR  +   L
Sbjct: 175 AVHQELIEHNPAANLDGIIATPVKRHYPALPLEQLPELLTRIEGYRQGRELTRLAVLLTL 234

Query: 244 HTMTRPAEASGARWDEINWEEKVWTIPAER------------MKKRREHRIPLTEQMLAL 291
           H   R +E   ARW EI++   +WTIPA R             K R  H +PL+ Q +A+
Sbjct: 235 HLFIRSSELRFARWSEIDFRNHIWTIPATREAIPGVRYSGRGAKMRTPHIVPLSRQAIAI 294

Query: 292 LEVMKPISGHRDFIFPSDRAPKKPCNSQTANMALKRMGF--AGRLVSHGLRSLASTTLNE 349
           L+ ++ ISGH+  +FP D  P KP    T N AL+ MG+     +  HG R++A + L E
Sbjct: 295 LKQIREISGHQVLVFPGDHNPYKPMCENTVNKALRLMGYDTQNNICGHGFRAMACSALME 354

Query: 350 QG-FDPDLVESALAHVDDNQVRSAY-NRTDYLERRKPMMCWWSEHIEEAARG 399
            G +  D VE  ++H + N VR+AY  + +YL+ RK MM WWS++++    G
Sbjct: 355 SGLWSQDAVERQMSHQERNSVRAAYIQKAEYLDARKAMMQWWSDYLDMTREG 406