Pairwise Alignments

Query, 422 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 395 a.a., tyrosine-type recombinase/integrase from Dickeya dianthicola ME23

 Score =  424 bits (1089), Expect = e-123
 Identities = 205/389 (52%), Positives = 277/389 (71%)

Query: 1   MAKNTVKLTDKEIKASKPREKEYNLFDGDGLRLRIKPNGSKQWIFNYYRPTNGKRANLSF 60
           MA+ T  LT  E++ +K  +K+  L DG+GL L +K  G K W F Y +PT G+R  + F
Sbjct: 1   MARTTRPLTHIEVQKAKAADKDLTLHDGNGLFLLVKTTGKKLWRFRYQKPTTGQRTMIGF 60

Query: 61  GMYPDISLLQARKSLLSAKELIAQGIDPQDDRKRQQQVHKEIHEHTFENVTKDWFAIKQN 120
           G YP +SL   R        L+A+GIDPQ+   ++ +  +   E  F NV + WF +KQ 
Sbjct: 61  GAYPALSLADVRAMRDEKLSLLAKGIDPQEKVAKEVEEAQIAVESLFINVARSWFTLKQA 120

Query: 121 DVTPDYALDIWRSLELHIFPHISDKPVKAITAPEIIELLKPIEAKGSLETVKRLTQRLNE 180
            V+ D+A DIWRSLE  + P I + PV+ I A  +I+ L+PI+A+G+LETV+RL QR+NE
Sbjct: 121 TVSTDHAKDIWRSLEKDVLPAIENIPVQQIKARTLIQALEPIKARGALETVRRLVQRINE 180

Query: 181 VMNFATNCGLIQANPLTGIKAAFKKPKKENMAALTPAELPELMSAIANASIKRTTRCLLE 240
           +M +A N GLI ANP +GI  AF++PKK++M  + P ELP LM  IA +++   TRCLLE
Sbjct: 181 IMVYAVNTGLIDANPASGIGMAFERPKKQHMPTIRPEELPALMRTIAMSNLSIPTRCLLE 240

Query: 241 WQLHTMTRPAEASGARWDEINWEEKVWTIPAERMKKRREHRIPLTEQMLALLEVMKPISG 300
           WQL T+ RPAEAS   W EI+ E+K W+IPAERMK +R+H +PL+EQ L LL++M+PISG
Sbjct: 241 WQLLTLIRPAEASATAWAEIDIEKKTWSIPAERMKAKRDHIVPLSEQALELLDIMRPISG 300

Query: 301 HRDFIFPSDRAPKKPCNSQTANMALKRMGFAGRLVSHGLRSLASTTLNEQGFDPDLVESA 360
           +RD++FPS   PKKP NSQTAN ALKR+G+ G+LV+HGLRS+AST +NE GF+PD++ESA
Sbjct: 301 NRDYVFPSRNDPKKPMNSQTANAALKRIGYGGKLVAHGLRSIASTAMNEAGFNPDVIESA 360

Query: 361 LAHVDDNQVRSAYNRTDYLERRKPMMCWW 389
           LAH D N+VR AYNR+ YLE+RK +M WW
Sbjct: 361 LAHCDKNEVRRAYNRSTYLEQRKELMDWW 389