Pairwise Alignments

Query, 78 a.a., preprotein translocase from Vibrio cholerae E7946 ATCC 55056

Subject, 402 a.a., CPZ-55 prophage; predicted integrase (RefSeq) from Escherichia coli BW25113

 Score = 47.4 bits (111), Expect = 1e-10
 Identities = 28/68 (41%), Positives = 34/68 (50%), Gaps = 2/68 (2%)

Query: 12  GHRTFIFPSSRNPKVPTNTETANKSLSRIGFKDRVIAHGVRALASTTFNEQG-FKPDVIE 70
           G+  F+FP     K P +     K+L RIG+K     HG R   ST  NE G + PD IE
Sbjct: 296 GYSAFVFPGRFMDK-PLSASAILKALERIGYKSIATGHGWRTTFSTALNESGRYSPDWIE 354

Query: 71  PALAHTNK 78
             LAH  K
Sbjct: 355 IQLAHVPK 362