Pairwise Alignments
Query, 1520 a.a., accessory colonization factor AcfD from Vibrio cholerae E7946 ATCC 55056
Subject, 1520 a.a., lipoprotein metalloprotease SslE from Escherichia coli ECRC62
Score = 1388 bits (3592), Expect = 0.0
Identities = 730/1494 (48%), Positives = 983/1494 (65%), Gaps = 87/1494 (5%)
Query: 52 PDPIISLS--MTLDGNLKFDSSLLCNDQDASHFQISQKDNVFCTI-NGRSIATFTAPFDA 108
P+P+ + + +TL G+L+ + CND+ + F + D V C N +IATF +A
Sbjct: 84 PEPVPTKTGYLTLGGSLRVTGDITCNDESSDGFTFTPGDKVTCVAGNNTTIATFDTQSEA 143
Query: 109 NKNGRNTDSEVLSLISADEYRDSPVRQENLQILMKNMATI--HGDKISLVFRSTLDALTF 166
++ R + SL A E S ++ N L+ +M + + +++ L F S +++ F
Sbjct: 144 ARSLRAVEKVSFSLEDAQELAGSDNKKSNALSLVTSMNSCPANTEQVCLEFSSVIESKRF 203
Query: 167 ENYLRHNLDLPKDQFLEAITEKIANDNQVDKQPSTHVPNISPSFTPGTSSNLNSPFVSAN 226
++ L +DL ++F + + E++ N+ DK PSTH + P+ TPGT +LN+ FVSAN
Sbjct: 204 DS-LYKQIDLAPEEFKKLVNEEVENNAATDKAPSTHTSPVVPATTPGTKPDLNASFVSAN 262
Query: 227 AEESLSYIPTDVIPSLGRLLDSQGRVINGVSYFSNNTRGITGVDKTGAILNDGSFEFSWG 286
AE+ Y PT++I S GRL+DSQG + GV+Y++N+ RG+TG +G F FSWG
Sbjct: 263 AEQFYQYQPTEIILSEGRLVDSQGDGVVGVNYYTNSGRGVTG--------ENGEFSFSWG 314
Query: 287 DIISFSIDTFELGSTRANKTDFYISELGKDNEGKNAEALIHRYASIDDSKL-IIPDKVTQ 345
+ ISF IDTFELGS R NK+ ++ELG + G N + LIHRY+ + ++PD+V +
Sbjct: 315 ETISFGIDTFELGSVRGNKSTIALTELGDEVRGANIDQLIHRYSKAGQNHTRVVPDEVRK 374
Query: 346 IFSLYPNVINEVISLSLPNGDIELDIGDGKTQI-VPGEFFKQFDSGLAALIDQSISPISR 404
+F+ YPNVINE+I+LSL NG +G+G+ + +P EF +QF +G A ID +I
Sbjct: 375 VFAEYPNVINEIINLSLSNG---ATLGEGEQVVNLPNEFIEQFKTGQAKEIDTAICA--- 428
Query: 405 FKFEDSLPKKKSAIDSES---SQIQDIINKLWGATDTVQANGWKKVDRFHIFHDSTNFYG 461
K + + ++ + + QIQ +INKLWG DT +K V +FH+FHDSTNFYG
Sbjct: 429 -KTDGCNEARWFSLTTRNVNDGQIQGVINKLWGV-DT----NYKSVSKFHVFHDSTNFYG 482
Query: 462 STGSARAQAAVNIANSAFPVLMARNDNNYWIDFGKPKAWDSNSLAFITEAPSTVVPDKVS 521
STG+AR QA VNI+N+AFP+LMARND NYW+ FG+ +AWD N LA+ITEAPS V P+ V+
Sbjct: 483 STGNARGQAVVNISNAAFPILMARNDKNYWLAFGEKRAWDKNELAYITEAPSIVRPENVT 542
Query: 522 EDTSTFNLPFISLGEIGKGKLMVLGNARYNSVLVCPNGFSW-GGTVKNGTCSLSSDRDDM 580
+T+TFNLPFISLG++G GKLMV+GN YNS+L CPNG+SW GG K+G C+L+SD DDM
Sbjct: 543 RETATFNLPFISLGQVGDGKLMVIGNPHYNSILRCPNGYSWNGGVNKDGQCTLNSDPDDM 602
Query: 581 ANFFSNVIRYLTGS-----TSNDVIVGTNIPEVYFKSSGQTMGSKANFELDSRFSKQT-Q 634
NF NV+RYL+ + + VGTN+ VYFK GQ +G+ A F F+ T +
Sbjct: 603 KNFMENVLRYLSNDRWLPDAKSSMTVGTNLDTVYFKKHGQVLGNSAPFAFHKDFTGITVK 662
Query: 635 QLTSFHDLDVNTIPLIIINAYDYKGKNINSPYDIPLSADVGSPKLSRSDVTDLIDYINNG 694
+TS+ +L+ + +PL+I+N ++Y + + PY IPL AD PKL++ DVTDLI Y+N G
Sbjct: 663 PMTSYGNLNPDEVPLLILNGFEYVTQWGSDPYSIPLRADTSKPKLTQQDVTDLIAYMNKG 722
Query: 695 GSVLMMETIINTNNSEIS----RLLDSAGIAFGIGNSVVADGNGPSGGHPDRPRSQREHG 750
GSVL+ME +++ E + RLLD+AG++ + SVV N G+PDR R +R
Sbjct: 723 GSVLIMENVMSNLKEESASGFVRLLDAAGLSMALNKSVV---NNDPQGYPDRVRQRRSTP 779
Query: 751 IWVIERYAAVEDESSGQQTLPYVIN-SDGSIEWKYIVENRPDDKPKLEVASWVESEAGDK 809
IWV ERY AV+ + PY I+ + + WKY EN+PDDKPKLEVASW E G K
Sbjct: 780 IWVYERYPAVDGKP------PYTIDDTTKEVIWKYQQENKPDDKPKLEVASWQEEVEG-K 832
Query: 810 LITHYAFIDESQHWKKDISGKIIYNVAGKPEVDNASLSLAKNKVLDAFKNSSGQRAYSEC 869
+T +AFIDE+ H PE SL+ AK ++LDAF C
Sbjct: 833 QVTQFAFIDEADH--------------KTPE----SLAAAKQRILDAFPG------LEVC 868
Query: 870 KNSEFHYEINCLEYRPGNSIPITGGLYVPRYTDIKLGESEANAMVKAANLGTNIHALYQH 929
K+S++HYE+NCLEYRPG +P+TGG+YVP+YT + LG A AM++AA+LGTNI LYQH
Sbjct: 869 KDSDYHYEVNCLEYRPGTGVPVTGGMYVPQYTQLDLGADTAKAMLQAADLGTNIQRLYQH 928
Query: 930 ERYFRTKGKSGARLNSVDLNRIYQNMSVWLWNDLDYRYDDKQSDELGFKVFTQYLNCYTS 989
E YFRT G G RLNSVDL R+YQNMSVWLWN+ YRY++ + DELGFK FT++LNCYT
Sbjct: 929 ELYFRTNGLQGERLNSVDLERLYQNMSVWLWNETKYRYEEGKEDELGFKTFTEFLNCYT- 987
Query: 990 NNAGGNTTCPEELKDELTQLGMIYDEKSGSYAGQMDPSYPLNYMEKPLTRLMLGRSFWDL 1049
NNA T C ELK L MIY E+S S AG M+PSYPLNYMEKPLTRLMLGRS+WDL
Sbjct: 988 NNAYVGTQCSAELKKSLIDNKMIYGEES-SKAGMMNPSYPLNYMEKPLTRLMLGRSWWDL 1046
Query: 1050 DIKVDVRKYPGEVTTRSGGGDITLDMRNNTAAWFAGNRQPTGQWAEAHQPFSVSVSGETS 1109
+IKVDV KYPG V+ T+ + +N WFAGN Q TG WA A + ++ S
Sbjct: 1047 NIKVDVEKYPGAVSEEGQNVTETISLYSNPTKWFAGNMQSTGLWAPAQKEVTIK-SNANV 1105
Query: 1110 PVTITIALADDLTGREKHELGLKRPPRMSKSFVIGGDSPKMQTFTVPYGGLIYAQGGN-- 1167
PVT+T+ALADDLTGREKHE+ L RPPR++K++ + D+ F VPYGGLIY +G +
Sbjct: 1106 PVTVTVALADDLTGREKHEVALNRPPRVTKTYSL--DASGTVKFKVPYGGLIYIKGDSKD 1163
Query: 1168 SQQVKLTFSGTIDAPLYIDGKWRNPLLSGAPIGEVVSDTFIFTAPKANLNADGYLGGIEQ 1227
++ TF+G + AP Y DG W+N L S AP+GE+ SD F++TAPK NLNA Y GG++Q
Sbjct: 1164 NESASFTFTGVVKAPFYKDGAWKNDLNSPAPLGELESDAFVYTAPKKNLNASNYTGGLKQ 1223
Query: 1228 FAKDLDQFSADLNDFYARDEGADGDKNRKATDKSMPNNRHHFVNDVAISVGAAHSGYPVM 1287
FA DLD F++ +NDFY R+E + K+R T K++ ++H F NDV IS+G AHSGYPVM
Sbjct: 1224 FANDLDTFASSMNDFYGRNE--EDGKHRMFTYKNLTGHKHRFANDVQISIGDAHSGYPVM 1281
Query: 1288 NDSFITSSRSLNTMPLNSWLLWHEVGHNSAEAPFNVDGATEVVNNLLALYMQDRHQGKMS 1347
N SF T+S +L T PLN WL+WHEVGHN+AE P V GATEV NN+LALYMQDR+ GKM+
Sbjct: 1282 NSSFSTNSTTLPTTPLNDWLIWHEVGHNAAETPLTVPGATEVANNVLALYMQDRYLGKMN 1341
Query: 1348 RVEQDIRYAFDFVNAEHGHAWGAGGAGERLVMFAQLKEWAETEFDINDWYND-KLPGFYI 1406
RV DI A +++ +G AW GGAG+RL+M+AQLKEWAE FDI WY + +LP F+
Sbjct: 1342 RVADDITVAPEYLEESNGQAWARGGAGDRLLMYAQLKEWAEKNFDIKKWYPEGELPKFFS 1401
Query: 1407 EESGIKGWNLFKLMHRLMRNENDDQINMKGENQCKISGIGKSDLLMLCASYAAQTDLSEF 1466
+ G+KGWNLF+LMHR R ++ G+N C S +D LMLCAS+ AQTDLSEF
Sbjct: 1402 DREGMKGWNLFQLMHRKARGDDVGDKTFGGKNYCAESNGNAADTLMLCASWVAQTDLSEF 1461
Query: 1467 FKAWNPGSKAFLYPDDPQPYYEGGITPSGIQRVKSLKLNLPQKNPLSINSVTQH 1520
FK WNPG+ A+ P + +EGG++ S + SLKL P++ P +IN VT+H
Sbjct: 1462 FKKWNPGANAYQLPGASEMSFEGGVSQSAYNTLASLKLPKPEQGPETINKVTEH 1515