Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 715 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  196 bits (499), Expect = 2e-54
 Identities = 116/345 (33%), Positives = 195/345 (56%), Gaps = 1/345 (0%)

Query: 281 ILASVFFAILLFTM-RLMLKPLHQLTDAMVNISSGSADLTVRIPNSTDQEFSKIINSFNI 339
           +LA+V   IL++ M R + +P+  +   + +I+SG  DLT R+      E  ++   FN 
Sbjct: 369 LLAAVVGLILVWLMARSVTRPILGVAHMLEDIASGEGDLTRRLAYDKQDELGQLAGWFNR 428

Query: 340 FVGNLQSIVSEVKMNSEKINCITTETQELVEVCNNSVADQYRELDMLASSMNEMVATSNQ 399
           F+  LQ I++EVK + +       ++  +    +  +  QYR++D +A++ +EM AT+  
Sbjct: 429 FLDKLQPIIAEVKRSVQDARGTADQSAAIATQTSAGMEQQYRQVDQVATASHEMSATAQD 488

Query: 400 IAQITSEASEITSKINGQVNEGVGAVSSVTESVGNLVEKLDKTKSVIQDLNRQTQNIDVI 459
           +A+  ++A++     +    +G+  +   T ++G L   +    + ++ L   ++ I  +
Sbjct: 489 VARSAAQAAQAARDADQATRDGLTVIEHTTHNIGALASDMSTAMTQVEGLAANSEKIGSV 548

Query: 460 LKAINDIADQTNLLALNAAIEAARAGENGRGFAVVADEVRSLAIKTQESTKNIGSIIHIL 519
           L+ I  IA+QTNLLALNAAIEAARAGE GRGFAVVADEVR+LA +TQES +    +I  L
Sbjct: 549 LEVIRGIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQESVEETRLVIEHL 608

Query: 520 QENSLLSVHVMDESFNIASETMTISADSKQCLDNISQSVIQIVDITNQVATAAYEQSHVS 579
           Q  +   V  M  S+  A  ++     +   L  I  +V  I D+  Q+A+AA EQS V+
Sbjct: 609 QNGTEAVVGSMGNSYRQAQGSVEQVGQAVTALRQIGDAVTVISDMNLQIASAAEEQSAVA 668

Query: 580 EEINSNSISIKDKADTLSSLGNKISQQAYSQKALIGHQDDLISKF 624
           EEIN+N  +I+D  ++LS   N+ ++ + +  +L   Q  L+ +F
Sbjct: 669 EEINNNVATIRDVTESLSEQANESARVSQALNSLANQQQGLMDQF 713