Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 493 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  172 bits (436), Expect = 3e-47
 Identities = 106/318 (33%), Positives = 170/318 (53%), Gaps = 1/318 (0%)

Query: 274 NSIFTAVILASVFFAILLFTMRLMLKPLHQLTDAMVNISSGSADLTVRIPNSTDQEFSKI 333
           N     +IL           +R +L  L+ L D M+++   + DL+ R+P +   E  ++
Sbjct: 142 NYAVAVLILMLAMLGASQLLIRFLLSQLNTLKDVMLHVEK-TGDLSARVPLACKDEVGQM 200

Query: 334 INSFNIFVGNLQSIVSEVKMNSEKINCITTETQELVEVCNNSVADQYRELDMLASSMNEM 393
            ++FN      Q +V+ V   + +++         +    + +  Q  E D  A+++NEM
Sbjct: 201 ASAFNAMQAGYQRVVNTVAHTARQLDDGAARLASSMNEVQHGMLGQQSETDQAATAINEM 260

Query: 394 VATSNQIAQITSEASEITSKINGQVNEGVGAVSSVTESVGNLVEKLDKTKSVIQDLNRQT 453
            AT + IAQ      +++   +     G   V+ V  S+  L   + +T  +IQ L   +
Sbjct: 261 TATVHHIAQHAGATRDLSQTADTLAGSGQEVVTRVQRSIAGLSTGVQQTAVMIQKLAEDS 320

Query: 454 QNIDVILKAINDIADQTNLLALNAAIEAARAGENGRGFAVVADEVRSLAIKTQESTKNIG 513
           Q I+ ++  I+ IA+QTNLLALNAAIEAARAGE GRGFAVVADEVR+LA + Q ST  I 
Sbjct: 321 QKINGVVSVIHSIAEQTNLLALNAAIEAARAGEMGRGFAVVADEVRNLAKRVQSSTDEIT 380

Query: 514 SIIHILQENSLLSVHVMDESFNIASETMTISADSKQCLDNISQSVIQIVDITNQVATAAY 573
            ++  LQ  +  +V  M ES   A + +  + ++   L  I+ +V Q+ +   Q+A AA 
Sbjct: 381 RMVSALQAGTRDAVDFMQESSFKADDCVHQAQEAGAALAEITGAVAQMRESNTQIAVAAE 440

Query: 574 EQSHVSEEINSNSISIKD 591
           +QSHV+EE+N   +SI+D
Sbjct: 441 QQSHVAEEMNRAVVSIRD 458