Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  340 bits (871), Expect = 1e-97
 Identities = 208/627 (33%), Positives = 350/627 (55%), Gaps = 11/627 (1%)

Query: 5   IKLLMIFTSIIITISSILTYFQMHGT-NEYLDRTIKDTISETLDSLEDKINLSIESKVDV 63
           +K L+  +S I+ ++     ++ + T  + +   I+D I+E ++  E  ++L +ES + +
Sbjct: 6   VKKLIFISSFILLVTVAFVVWEGYTTAKKEVSVVIEDGINEIINKTERFVSLKLESDISL 65

Query: 64  SKSVIDIYENLLEGESPLSKFKDVDVNHLSNVFQLFGYADERTGEIITNDPNFKVPTGFD 123
           + S++D     +  E  ++    ++ N +   F   G+  +  G++I NDPN++    +D
Sbjct: 66  ASSIVDSISLRISDEQYINDI--INGNAIKKAFLSTGFGFDSNGKVIENDPNWEPEDDYD 123

Query: 124 PRTRSWYLNAKKLNTFSLSEPYVDLITEKLMVTTSAPIYNK-NDLTGVIFFDIPLDDVQE 182
           PR+R WY  AKK     ++EPY+D   +  +V+ S+P+ +  N+  G ++FD+ L  +Q+
Sbjct: 124 PRSRGWYQEAKKNKRIFITEPYLDTEGKNFLVSISSPVADTMNNFIGAMYFDVDLSRIQK 183

Query: 183 LIKSYNPFDAGTIFIVDNSGKIIFGNKNDISGKNLFGDFDSFPLSVSESKTKDKNGVNYD 242
            +   N F+AG +FI  N+GK+I  +  D  GKN+   ++ F L   +      NGVN  
Sbjct: 184 NVDDINLFEAGYVFITSNTGKVIIHSNTDELGKNVKDIYNGFRLDKGKV-VLSVNGVNKW 242

Query: 243 VLIKMSDFGGWNLVSIIDHDKARSDIITLRNNSIFTAVILASVFFAILLFTMRLMLKPLH 302
           +       G W ++++ID   A   I  ++   IF + I       IL+F +R ++ PL 
Sbjct: 243 LYTSPILGGDWFIIAVIDESIAMQSINKMKYELIFYSAIGLVFGGLILVFILRRLMSPLK 302

Query: 303 QLTDAMVNISSGSADLTVRIPNSTDQEFSKIINSFNIFVGNLQSIVSEVKMNSEKINCIT 362
            L  A+ +I+SG  DLT ++  + D+EFS++   FN F   L S + ++K  +  +    
Sbjct: 303 TLDSAIKDIASGGGDLTKKLDTNLDKEFSELALGFNSFTEMLGSQIRQLKTIASGVLDGA 362

Query: 363 TETQELVEVCNNSVADQYRELDMLASSMNEMVATSNQIAQITSEASEITSKINGQVNEGV 422
            +T    EV    V  Q +EL+ LA++MNEM  T++++A     A++   +      EG 
Sbjct: 363 EKTANEAEVSRLVVEQQLQELEQLATAMNEMAMTASEVANSAQVAADAAKEGESASLEGS 422

Query: 423 GAVSSVTESVGNLVEKLDKTKSVIQDLNRQTQNIDVILKAINDIADQTNLLALNAAIEAA 482
             V   T+++  L  ++  +   +++L + T  I+ +L  INDIADQTNLLALNAAIEAA
Sbjct: 423 SVVHETTDAIQRLSIRIGSSVEDVKELVKATDRIETVLDVINDIADQTNLLALNAAIEAA 482

Query: 483 RAGENGRGFAVVADEVRSLAIKTQESTKNIGSIIHILQENSLLSVHVMDESFNIASETMT 542
           RAGE+GRGFAVVADEVR+LA +TQ+ST  I  II  LQE +      MDES     ET  
Sbjct: 483 RAGESGRGFAVVADEVRTLAQRTQQSTMQISEIIEQLQEGAKNVSRSMDES---KLETDI 539

Query: 543 ISADSKQCLDNIS---QSVIQIVDITNQVATAAYEQSHVSEEINSNSISIKDKADTLSSL 599
           +   + Q  + IS   Q++ +I D+  Q+A+AA EQS V+EEIN+N+++IKD +  LS  
Sbjct: 540 VVEKTNQVNEKISLVQQAIHRISDMNLQIASAAEEQSLVAEEINNNTVNIKDLSIKLSEA 599

Query: 600 GNKISQQAYSQKALIGHQDDLISKFII 626
            +    +  +Q + +  Q++L+++F I
Sbjct: 600 ASNAGTEMNAQVSKVKEQNELLNEFKI 626