Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 556 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  181 bits (460), Expect = 6e-50
 Identities = 117/407 (28%), Positives = 216/407 (53%), Gaps = 7/407 (1%)

Query: 199 DNSGKIIFGNKNDISGKNLFGDFDSFPLSVSESKTKDKNGVNYDVLIKMSDFGGWNLVSI 258
           D +GK +F    +++ +N  G  +         +  DK  V+Y   +K+    GW + + 
Sbjct: 134 DPNGKALFVEMVNVTQRNQQGVVEYQWPKPGAEQPVDK--VSY---VKLFKPWGWIIGTG 188

Query: 259 IDHDKARSDIITLRNNSIFTAVILASVFFAILLFTM-RLMLKPLHQLTDAMVNISSGSAD 317
           I  D   + ++  R +SI   V+   +   +L   + R + +P  +    + NI+ G  D
Sbjct: 189 IYVDDVNA-LVMQRLSSILVWVVGTLLVLIVLASLIGRSITQPCEETLATLKNIAQGEGD 247

Query: 318 LTVRIPNSTDQEFSKIINSFNIFVGNLQSIVSEVKMNSEKINCITTETQELVEVCNNSVA 377
           LT ++  +   E ++I  +FN+F   ++ I+ E+   +E +     E  ++ +  ++   
Sbjct: 248 LTRQLTVTGKDELAQIAQAFNLFTNKIRHIIQEITPITESVTGSADELTQVAQSASSKAY 307

Query: 378 DQYRELDMLASSMNEMVATSNQIAQITSEASEITSKINGQVNEGVGAVSSVTESVGNLVE 437
           DQ++ +D +AS+MN++ A++ ++AQ   +A +     N   ++G   ++  +  + +L +
Sbjct: 308 DQHQAVDTVASAMNQLHASNQEVAQSAHQAEQAAHSANQAASQGREMITLTSTQMQSLRD 367

Query: 438 KLDKTKSVIQDLNRQTQNIDVILKAINDIADQTNLLALNAAIEAARAGENGRGFAVVADE 497
           +L +T+   Q L  +TQ++  +L+ I  +A+QTNLLALNAAIEAARAGE GRGFAVVADE
Sbjct: 368 QLTRTEQETQVLASETQSVSAVLEVIRGVAEQTNLLALNAAIEAARAGEQGRGFAVVADE 427

Query: 498 VRSLAIKTQESTKNIGSIIHILQENSLLSVHVMDESFNIASETMTISADSKQCLDNISQS 557
           VR+LA +TQ ST  I  II  LQ+ +      M ++   +  T   +  ++Q L+ I   
Sbjct: 428 VRTLATRTQASTNEIEQIIAQLQKKAQSVSQSMTQTQQQSRVTQQQAEQAQQMLNEIEAQ 487

Query: 558 VIQIVDITNQVATAAYEQSHVSEEINSNSISIKDKADTLSSLGNKIS 604
           +  I+     +A A+ +QS  ++EI  N   I + +   S+  N+++
Sbjct: 488 IKTILSFNQHIAGASAQQSEATDEITRNLTQIAEHSTQASAQANQVA 534