Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 714 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  205 bits (521), Expect = 6e-57
 Identities = 123/364 (33%), Positives = 199/364 (54%), Gaps = 2/364 (0%)

Query: 263 KARSDIITLRNNSIFTAVILASVFFAILLFTM--RLMLKPLHQLTDAMVNISSGSADLTV 320
           K   D +      +  ++ LA+    +LL  +  R + +P+  +   + +I+SG  DLT 
Sbjct: 349 KQELDALNTSGTLLELSLGLAAAIVGLLLVWLMARGVTRPILGVAAMLKDIASGEGDLTR 408

Query: 321 RIPNSTDQEFSKIINSFNIFVGNLQSIVSEVKMNSEKINCITTETQELVEVCNNSVADQY 380
           R+      E  ++   FN F+  LQ  ++EVK + +       ++  +    +  +  QY
Sbjct: 409 RLTYQKQDELGELAGWFNRFLDKLQPTIAEVKRSVQAARGTADQSSAIATETSAGMEQQY 468

Query: 381 RELDMLASSMNEMVATSNQIAQITSEASEITSKINGQVNEGVGAVSSVTESVGNLVEKLD 440
           R++D +A++ +EM AT+  +A+  ++A++     +    EG+  +   T S+G L   + 
Sbjct: 469 RQVDQVATASHEMSATAQDVARSAAQAAQAARDADQATREGLAVIDRTTSSIGALAANMS 528

Query: 441 KTKSVIQDLNRQTQNIDVILKAINDIADQTNLLALNAAIEAARAGENGRGFAVVADEVRS 500
            T + I+ L + ++ I  +L+ I  IA+QTNLLALNAAIEAARAGE GRGFAVVADEVR+
Sbjct: 529 DTMAEIEGLAQNSEKIGSVLEVIRSIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRN 588

Query: 501 LAIKTQESTKNIGSIIHILQENSLLSVHVMDESFNIASETMTISADSKQCLDNISQSVIQ 560
           LA +TQES +    +I  LQ  +   V  MD S   A   +     +   L  I Q+V  
Sbjct: 589 LAQRTQESVEETRQVIEALQNGTREVVGAMDHSHRQAQGGVEQVGQAVTALQRIGQAVTV 648

Query: 561 IVDITNQVATAAYEQSHVSEEINSNSISIKDKADTLSSLGNKISQQAYSQKALIGHQDDL 620
           I D+  Q+A+AA EQS V+EEINSN  +I+D  ++LS   N+ ++ + S  +L   Q  L
Sbjct: 649 ITDMNLQIASAAEEQSAVAEEINSNVATIRDVTESLSGQANESARVSQSLNSLANQQQAL 708

Query: 621 ISKF 624
           + +F
Sbjct: 709 MDQF 712