Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 643 a.a., Methyl-accepting chemotaxis protein PctB from Pseudomonas putida KT2440

 Score =  245 bits (626), Expect = 4e-69
 Identities = 192/639 (30%), Positives = 324/639 (50%), Gaps = 41/639 (6%)

Query: 1   MKFSIKLLMIFTSIIITISSILTYFQMHGTNEYLDRTIKDTISETLD-SLEDKINLSIES 59
           +KF  K+L+    +++   ++ T +     N+YL R   +TI + ++ S++    L+  S
Sbjct: 18  LKFRHKILLSACGVVVLAFALFTLY-----NDYLQR---NTIRQNIEASVQQSGALTASS 69

Query: 60  KVDVSKSVIDIYENLLE-----GESPLSKFKDVDVNHLSNVFQLFGYADERTGEIITNDP 114
             +     I + ENL +     G            ++  N   LF Y  +  GE  T  P
Sbjct: 70  VQNWMSGRILVLENLAQDIGQQGAGDTLAGLIEQPSYTRNF--LFTYLGQANGEF-TQRP 126

Query: 115 NFKVPTGFDPRTRSWYLNAKKLNTFSLSEPYVDLITEKLMVTTSAPIYNKN--DLTGVIF 172
           + ++P G+DPR R WY  A       L+ PY   +   LMVT + P+ +K   +L GV+ 
Sbjct: 127 DAQMPAGYDPRQRPWYGAAANAGQTVLTAPYQGAVGG-LMVTIATPVKSKRNGELIGVVG 185

Query: 173 FDIPLDDVQELIKSYNPFDAGTIFIVDNSGKIIFGNKNDISGKNLFGDFDSFPLSVSESK 232
            D+ LD + E+I S +    G  F+ D +G++I     D   KNL   +    L V+   
Sbjct: 186 GDVTLDTLVEIINSVDFGGIGHAFLADANGQVIVSPNKDQVMKNLKDIYPGSNLRVAAGM 245

Query: 233 TKDKNGVNYDVLIKMSDFGG-----WNLVSIIDHDKARSDIITLRNNSIFTAVILASVFF 287
            +D      D +I  +   G     W +   ID DKA + +   R ++I   +I  +   
Sbjct: 246 -QDVTLDGQDRIISFAPVAGLPSAQWYIGLSIDRDKAYAALSQFRTSAIIAMLIAVAAIA 304

Query: 288 AILLFTMRLMLKPLHQLTDAMVNISSGSADLTVRIPNSTDQEFSKIINSFNIFVGNLQSI 347
            +L   + +++ PL  +  AM +I+ G  DLT R+      EF ++  SFN FV  + + 
Sbjct: 305 GLLGLLIPVLMSPLTTMGRAMRDIAEGEGDLTRRLAVQNKDEFGELATSFNRFVERIHAS 364

Query: 348 VSEVKMNSEKINCITTETQELVEVCNNSVA---DQYRELDMLASSMNEMVATSNQIAQIT 404
           +SEV   +  ++ ++   +++V   N S+    +Q    + +A+++NE+ A + +IA+  
Sbjct: 365 ISEVSSATRLVHDLS---EKVVSASNASIIGSEEQSMRTNSVAAAINELGAATQEIARNA 421

Query: 405 SEASEITSKINGQVNEGVGAVSSVTESVGNLVEKLDKTKSVIQDLNRQTQNIDVILKAIN 464
           ++AS+  S  + Q + G   V     ++  L +++ ++ + I+ LN  T  I  IL  I 
Sbjct: 422 ADASQHASGASEQAHGGREVVEEAISAMTALSQRISESCAQIETLNASTDEIGKILDVIK 481

Query: 465 DIADQTNLLALNAAIEAARAGENGRGFAVVADEVRSLAIKTQESTKNIGSIIHILQENSL 524
            I+ QTNLLALNAAIEAARAGE GRGFAVVADEVR+LA +TQES + I  +I  LQ  S 
Sbjct: 482 GISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAEEIHRMITSLQVGSR 541

Query: 525 LSVHVMDESFNIASETMTISADSKQCLDNISQSVIQIVDITNQVATAAYEQSHVSEEIN- 583
            +VH M+ S   + +T+ ++  + + L +++Q + +I  +   VATA  EQ+ V E +N 
Sbjct: 542 EAVHTMNTSQVSSEQTVQVANQAGERLASVTQRIGEIDGMNQSVATATEEQTAVVESLNL 601

Query: 584 -------SNSISIKDKADTLSSLGNKISQQAYSQKALIG 615
                   N   +++  +TL    ++++QQA   K L+G
Sbjct: 602 DITQINALNQQGVENLNETLRHC-DQLAQQAGRLKQLVG 639