Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 688 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  192 bits (487), Expect = 5e-53
 Identities = 140/494 (28%), Positives = 246/494 (49%), Gaps = 19/494 (3%)

Query: 143 EPYVDLITEK--LMVTTSAPIYNKNDLTGVIFFDIPLDDVQELIKS--YNPFDAGTIFIV 198
           EPY+D +  +  LM + + P+     + GV+  DI L ++Q+L  +   + FD      +
Sbjct: 200 EPYLDEVNGRQVLMTSIALPLLEHGKVVGVVGLDIGLANLQQLSVNGRRDLFDGQGQVSI 259

Query: 199 DNSGKIIFGNKNDIS--GKNLFGDFDSFPLSVSESKTKDKNGVNYDVLIKMSDFGGWNLV 256
             +  ++ GN  D S  GK +        L V+   T   +   + V++++ +       
Sbjct: 260 ATAAGLLAGNSRDDSVLGKPMDKSVADGLLRVAHPFTPIPDTAPWQVVLELPE------- 312

Query: 257 SIIDHDKA----RSDIITLRNNSIFTAVILASVFFAILL--FTMRLMLKPLHQLTDAMVN 310
           S++         R D      N     + L +    +LL   T R + +P+  +   + +
Sbjct: 313 SVLQAPAVALNQRLDAHNQNANLTSLLIGLGTAIAGLLLVWLTARGVTRPILAVAARLED 372

Query: 311 ISSGSADLTVRIPNSTDQEFSKIINSFNIFVGNLQSIVSEVKMNSEKINCITTETQELVE 370
           I+SG  DLT R+  +   E  ++   FN F+  LQ ++++VK + ++      ++  +  
Sbjct: 373 IASGEGDLTRRLDYAHQDELGQLTGWFNRFLDKLQPVIAQVKGSLQEARNTADQSAAIAS 432

Query: 371 VCNNSVADQYRELDMLASSMNEMVATSNQIAQITSEASEITSKINGQVNEGVGAVSSVTE 430
             ++ +  Q+RE++ +A++ NEM AT+  +A   S+A++     +    EG+  V S  +
Sbjct: 433 QTSDGMQQQHREIEQVATAANEMSATALDVAHNASQAAQAARAADQASQEGLQLVDSTRQ 492

Query: 431 SVGNLVEKLDKTKSVIQDLNRQTQNIDVILKAINDIADQTNLLALNAAIEAARAGENGRG 490
            +  L   ++      + L  ++  I  +L+ I  IA+QTNLLALNAAIEAARAGE GRG
Sbjct: 493 GIDRLAAGMNTAMDEARALEDRSGQIGSVLEVIRTIAEQTNLLALNAAIEAARAGEAGRG 552

Query: 491 FAVVADEVRSLAIKTQESTKNIGSIIHILQENSLLSVHVMDESFNIASETMTISADSKQC 550
           FAVVADEVR LA +TQ S + I  +I  LQ+ +   V  M      A ++      +   
Sbjct: 553 FAVVADEVRGLAQRTQVSVEEIRQVIEGLQQGTQDVVGAMHAGQRQAQDSAARMEQALPA 612

Query: 551 LDNISQSVIQIVDITNQVATAAYEQSHVSEEINSNSISIKDKADTLSSLGNKISQQAYSQ 610
           L  I ++V  I D+  Q+A+AA EQS V+EE+N N   I+D  ++L+   ++ ++ + + 
Sbjct: 613 LQRIGEAVAVISDMNLQIASAAEEQSAVAEEVNRNVAGIRDVTESLAGQADESARISQAL 672

Query: 611 KALIGHQDDLISKF 624
             L   Q  L+ +F
Sbjct: 673 NRLANQQQALMEQF 686