Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., Methyl-accepting chemotaxis protein McpG from Pseudomonas sp. DMC3

 Score =  252 bits (644), Expect = 3e-71
 Identities = 186/632 (29%), Positives = 323/632 (51%), Gaps = 28/632 (4%)

Query: 1   MKFSIKLLMIFTSIIITISSILTYFQMHGTNEYLDRT-IKDTISETLDSLEDKINLSIES 59
           ++FS K+L+    I+I   +  T +     N++L R  I+D ++  L+ + +    +I++
Sbjct: 5   LRFSHKILLAAALIVIAAFASFTLY-----NDWLQRNAIRDDLNNYLNEMGEVTAGNIQT 59

Query: 60  KVDVSKSVID-IYENLLEGESPLSKFKDVDVNHLSNVFQLFGYADERTGEIITNDPNFKV 118
            +     +I+   +N+     P +    ++   L++ F +  Y  + TG   T  P+ K+
Sbjct: 60  WLSGRILLIENAAQNIAINPEPATVASLLEQKSLTSTF-MATYLGDATGHF-TIRPDVKM 117

Query: 119 PTGFDPRTRSWYLNAKKLNTFSLSEPYVDLITEKLMVTTSAPIYNKNDLTGVIFFDIPLD 178
           P GFDPR R WY  A+  +T +L+EPY+D  T +L+++ +          GV+  D+ L 
Sbjct: 118 PDGFDPRVRPWYKGAESSSTSTLTEPYIDAATGQLIISIATASKKAGQSVGVVGGDLSLQ 177

Query: 179 DVQELIKSYNPFDAGTIFIVDNSGKIIFGNKNDISGKNLFG----DFDSFPLSVSESKTK 234
            + + + + +    G +F+V   GKI+      +  K+L      D        SE    
Sbjct: 178 SLIDTLAARDFDGMGYVFLVSADGKILVHPDKALVMKSLKEAYPQDTPRISSDFSEVSVD 237

Query: 235 DKNGVNYDVLIKMSDFGGWNLVSIIDHDKARSDIITLRNNSIFTAVILASVFFAILLFTM 294
            K  +     IK      W +   ID D+A S +   R +++   +I  ++  A+L   +
Sbjct: 238 GKTRIVTFAPIKGLPSVNWYIGLSIDKDQAYSMLSEFRTSAVIATIIAVAIIIALLGMLI 297

Query: 295 RLMLKPLHQLTDAMVNISSGSADLTVRIPNSTDQEFSKIINSFNIFVGNLQSIVSEVKMN 354
           RL+++PLH +T AM +I+ G  DLT R+    + EF  +  +FN FV  +   + EV   
Sbjct: 298 RLLIQPLHVMTRAMEDIADGEGDLTKRLNIVNNDEFGILGTAFNRFVERIHGSIREVSSA 357

Query: 355 SEKINCITTETQELVEVCNNSVAD---QYRELDMLASSMNEMVATSNQIAQITSEASEIT 411
           + ++N +      +V   N+S+ +   Q      +A+++N++ A + +IA+  ++AS   
Sbjct: 358 TGQVNEVALR---VVAASNSSMYNSDQQASRTSSVAAAINQLGAAAQEIARNAAQASNQA 414

Query: 412 SKINGQVNEGVGAVSSVTESVGNLVEKLDKTKSVIQDLNRQTQNIDVILKAINDIADQTN 471
           S   G   +G   V    +++  L   L  + + I+ LN +T NI  IL+ I  I+ QTN
Sbjct: 415 SDARGLAEDGQQVVERSIKAMNQLSSMLSASSTNIESLNSKTVNIGQILEVITSISQQTN 474

Query: 472 LLALNAAIEAARAGENGRGFAVVADEVRSLAIKTQESTKNIGSIIHILQENSLLSVHVMD 531
           LLALNAAIEAARAGE GRGFAVVADEVR+LA +TQES + + ++I  LQ  +  SV  M 
Sbjct: 475 LLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAQQVQTMIEELQVGARESVSTMS 534

Query: 532 ESFNIASETMTISADSKQCLDNISQSVIQIVDITNQVATAAYEQSHVSEEIN-------- 583
           +S   + +++ I+  + + L++++  + +I  +   VATA  EQ+ V E IN        
Sbjct: 535 DSQRHSQDSVEIANLAGERLNSVTLRIGEIDGMNQSVATATEEQTAVVESINVDITEINT 594

Query: 584 SNSISIKDKADTLSSLGNKISQQAYSQKALIG 615
            N   +++   TL +  + + QQA   K L+G
Sbjct: 595 LNQEGVENLQATLRACSD-LEQQASRLKQLVG 625