Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 594 a.a., Methyl-accepting chemotaxis protein from Enterobacter asburiae PDN3

 Score =  183 bits (465), Expect = 2e-50
 Identities = 151/544 (27%), Positives = 256/544 (47%), Gaps = 38/544 (6%)

Query: 44  ETLDSLEDKINLSIESKVDVSKSVIDIYENLLEGESPLSKFKDV-DVNHLSNVFQLFGYA 102
           + L S     N++I   V    +VI   + +   + P+  FK +      +NV+   GYA
Sbjct: 42  DILTSTSASHNMAIADWVKSKMTVIASAQTVALNDDPVPVFKQLAQAGGFTNVY--VGYA 99

Query: 103 DERTGEIITNDPNFKVPTGFDPRTRSWYLNAKKLNTFSLSEPYVDLITEKLMVTTSAPIY 162
             +T +   ++P   VP  +DP  R WY      +   ++ PYVD  T KL+VT + P+ 
Sbjct: 100 S-KTAKF--SEPA-GVPADYDPTIRPWYQQVVSTDGPVVTAPYVDAGTGKLVVTFAVPVK 155

Query: 163 NKNDLTGVIFFDIPLDDVQELIKSYNPFDAGTIFIVDNSGKIIFGNKNDISGK---NLFG 219
               L  V+  D+ +D V   ++  +P  A +  ++++ G +I  N   ++ K       
Sbjct: 156 ENGTLKAVVAGDVAMDSVVANVRGIHPTPASSGLLLNSDGSVIAANDPALTLKPFAETIK 215

Query: 220 DFDSFPLSVSESKTKDKNGVNYDVLIKMSDFGGWNLVSIIDHDKARSDIITLRNNSIFTA 279
             D   L          N      +        W LV  +D   A S + +L   S  + 
Sbjct: 216 GIDFAALKSGNPVDGTLNDAEKTFVATAVPGTNWLLVVALDSGDATSGMRSLLKASGISL 275

Query: 280 VILASVFFAILLFTMRLMLKPLHQLTDAMVNISSGSADLTVRIPNSTDQEFSKIINSFNI 339
           VILA +  AI+ F +  +LK L  + DAM +I++G+ DL+ R+P++ + E ++I  +FN 
Sbjct: 276 VILALLSAAIVHFLIARLLKRLSDIRDAMHSIANGTNDLSQRLPDNGEDEVAQIAQAFNA 335

Query: 340 FVGNLQSIVSEVKMNSEKINCITTETQELVEVCNNSVADQYRELDMLASSMNEMVATSNQ 399
           F   L  ++ +++  SE +     E    +   N  ++ +    +  ASS+ E  +   Q
Sbjct: 336 FSDKLSVVMVQLRDASESVKNAAQE----IAAGNQDLSGR---TEQAASSLRETASAVEQ 388

Query: 400 IAQITSEASEITSKINGQVNEGVGAVSSVTESVGNLVEKLDKTKSVIQDLNRQTQNIDVI 459
           I    ++++E  ++ N Q ++   A +   E V   +       S +Q +   +  I  I
Sbjct: 389 ITASVTQSNESAAEANDQASKASAAAARGGEVVSQAI-------STMQSIEVASAKIGDI 441

Query: 460 LKAINDIADQTNLLALNAAIEAARAGENGRGFAVVADEVRSLAIKTQESTKNIGSIIHIL 519
              I+ IA QTN+LALNA++EAARAGE GRGFAVVA EVR+LA ++ ++ K I S+I   
Sbjct: 442 TSVIDGIAFQTNILALNASVEAARAGEQGRGFAVVAGEVRNLASRSAQAAKEIKSLI--- 498

Query: 520 QENSLLSVHVMDESFNIASETMTISADSKQCLDNISQSVIQIVDITNQVATAAYEQSHVS 579
            +++  SV       ++A E+M          D I  S+  +  I  +++ A  EQ    
Sbjct: 499 -DSTTDSVATGSRYVHLAGESM----------DEIRSSIGSVSGIMREISIATSEQMKGI 547

Query: 580 EEIN 583
            EIN
Sbjct: 548 HEIN 551



 Score = 28.1 bits (61), Expect = 0.001
 Identities = 23/110 (20%), Positives = 50/110 (45%)

Query: 347 IVSEVKMNSEKINCITTETQELVEVCNNSVADQYRELDMLASSMNEMVATSNQIAQITSE 406
           +  EV+  + +      E + L++   +SVA   R + +   SM+E+ ++   ++ I  E
Sbjct: 476 VAGEVRNLASRSAQAAKEIKSLIDSTTDSVATGSRYVHLAGESMDEIRSSIGSVSGIMRE 535

Query: 407 ASEITSKINGQVNEGVGAVSSVTESVGNLVEKLDKTKSVIQDLNRQTQNI 456
            S  TS+    ++E   AV+ +   V    E + ++ +    L  Q  ++
Sbjct: 536 ISIATSEQMKGIHEINHAVTHLDRMVQQNAELVVESAAAAGALQSQAGDL 585