Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 596 a.a., methyl-accepting chemotaxis protein from Dickeya dianthicola ME23

 Score =  199 bits (507), Expect = 2e-55
 Identities = 173/621 (27%), Positives = 301/621 (48%), Gaps = 56/621 (9%)

Query: 6   KLLMIFTSIIITISSILTYFQMHGTNEYLDRTIKDTISETLDSLEDKINLSIESKVDVSK 65
           ++L + T+II+    I T+     T++Y D    ++I+  L ++    +L+I   V   K
Sbjct: 8   RILAVCTAIIVVALVINTFLNYRVTDKYND----ESINNLLTAVTAGHSLAISDWVAAKK 63

Query: 66  SVIDIYENL-LEGESPLSKFKDVDV-NHLSNVFQLFGYADERTGEIITNDPNFKVPTGFD 123
            +I     + L  + P+  FK +       NV+   GYA   T +    DP   +P  +D
Sbjct: 64  QIITSLNTVVLTNDDPIPVFKQMTTAGSFINVYM--GYASH-TAKFA--DPG-GIPANYD 117

Query: 124 PRTRSWYLNAKKLNTFSLSEPYVDLITEKLMVTTSAPIYNKNDLTGVIFFDIPLDDVQEL 183
           P  R WY  A +      + PY+D+ T  ++V+  AP+ +   + GV+  D+ +D V   
Sbjct: 118 PTVRPWYQQAVREGKAIATAPYLDMATNTIVVSFVAPVLDGGSVKGVLGSDVTMDSVIAN 177

Query: 184 IKSYNPFDAGTIFIVDNSGKIIFGNKNDISGKNL--FGDFDSFPLSVSESKTKDKNGVNY 241
           +K+ +P  A    ++   G II      ++ K L       +  L +   +    N   +
Sbjct: 178 VKAIHPTPASYGILIQADGTIIAHPDAKLTLKKLTEIAPQMNLGLVLKSDRPVPLNISGH 237

Query: 242 DVLIKMSDFGG--WNLVSIIDHDKARSDIITLRNNSIFTAVILASVFFAILLFTMRLMLK 299
           D+L++     G  W ++  +D  +A + + +L   S+   VI++ +   +L   +   LK
Sbjct: 238 DMLVRTQPVTGTDWYVLVALDKAEATAGMDSLLWTSVIALVIISVLGSVVLGLLINASLK 297

Query: 300 PLHQLTDAMVNISSGSADLTVRIPNSTDQEFSKIINSFNIFVGNLQSIVSEVKMNSEKIN 359
            L Q+ DAM +IS G+ DLT R+P+    E S+I  SFN FV  L  I+ +++  S  + 
Sbjct: 298 RLLQIRDAMDDISHGNNDLTQRLPDEGHDEVSQIARSFNSFVDKLSMIMLQIRDISASLQ 357

Query: 360 CITTETQELVEVCNNSVADQYRELDMLASSMNEMVATSNQIAQITSEASEITSKINGQVN 419
             T E    V   NN +A +    +  A+S+ +  A   QI+   ++++        QVN
Sbjct: 358 TATDE----VATGNNDLASR---TESAAASLQQTAAALEQISAAVTQSAGSAQ----QVN 406

Query: 420 EGVGAVSSVTESVGNLVEKLDKTKSVIQDLNRQTQNIDVILKAINDIADQTNLLALNAAI 479
           +   A+++   + G +V ++  T   I+  + +   I  I+  I+ IA QTN+LALNAA+
Sbjct: 407 DRALALANDAGTGGKVVSEVIDTMEAIEVASGK---IGDIIGVIDGIAFQTNILALNAAV 463

Query: 480 EAARAGENGRGFAVVADEVRSLAIKTQESTKNIGSIIHILQENSLLSVHVMDESFNIASE 539
           EAARAGE GRGFAVVA EVRSLA ++ ++ K I ++I    E+++LSV+V       A  
Sbjct: 464 EAARAGEQGRGFAVVAGEVRSLAQRSAQAAKEIKTLI----ESTVLSVNVGSRQVRQAGN 519

Query: 540 TMTISADSKQCLDNISQSVIQIVDITNQVATAAYEQSHVSEEIN-----------SNSIS 588
           TM          + I   V  +  + +++  A+ EQ    +EIN            N+  
Sbjct: 520 TM----------NEIVGGVSSVTTVMSEITHASGEQMRGIQEINKAVAQLDSMVQQNAAM 569

Query: 589 IKDKADTLSSLGNKISQQAYS 609
           +++ A    SL ++ S++ +S
Sbjct: 570 VQEAASAFGSLQSQ-SEELHS 589