Pairwise Alignments

Query, 340 a.a., toxin coregulated pilus biosynthesis protein E from Vibrio cholerae E7946 ATCC 55056

Subject, 359 a.a., pilus assembly protein PilR from Dickeya dianthicola ME23

 Score = 59.3 bits (142), Expect = 1e-13
 Identities = 57/249 (22%), Positives = 106/249 (42%), Gaps = 11/249 (4%)

Query: 5   SKKYRLELYSMLVDLLNDNIPLYDALNKIQNEGVGIYDKNFIKSIELIKDRMKSNSS--- 61
           + +YR   Y  L  LL++  PL +AL  I +     + + +   IEL+ D +++ S    
Sbjct: 17  TSRYRQPFYETLRFLLDNKTPLAEALQMIGDVHTD-FGRRWSPYIELVDDCLEALSDNRA 75

Query: 62  ---LTDALTGLIPDKEVLMINVAENSGKISSGIAAIRKNIIDADEIKSKAISSMITPSVM 118
              L D L    P +E  +I+    SG +   +    K I+    I  + + + I P V+
Sbjct: 76  GRELQDVLAVWAPSEEAALISAGMQSGGLPRALMQADKLIMARRRILLQVLFASIYPLVL 135

Query: 119 LIVTMVVIAGYSVKVFPTFESVLPVSRWPGVTQALYNLGFSLYEGLWIKVLIFVAIFITI 178
           +I+   ++A  ++ + PT  ++     W G    +  +  + +   W  V     + + I
Sbjct: 136 VILGGALLAVNNLMLVPTLSTMSDPKNWSGALGLMNTI--ATWTSEWGVVAGVGGVLLVI 193

Query: 179 LVFMS-KNITGNFRDGFLDKLPPFNFVKHIAATEFLANMSMLLDSRVPFKEGLDIVDHKT 237
            V  S     G  R    D   P++  K +    FL N++ LL + VP  + L ++    
Sbjct: 194 GVTWSLPRWCGQLRI-LADYALPWSLYKDLQGAVFLMNVAALLGAGVPELKALQVLHGYG 252

Query: 238 TRWLSSHLQ 246
           + WL   L+
Sbjct: 253 SAWLQERLE 261