Pairwise Alignments

Query, 340 a.a., toxin coregulated pilus biosynthesis protein E from Vibrio cholerae E7946 ATCC 55056

Subject, 401 a.a., Type II secretion system protein F from Acinetobacter radioresistens SK82

 Score = 63.2 bits (152), Expect = 1e-14
 Identities = 65/314 (20%), Positives = 137/314 (43%), Gaps = 12/314 (3%)

Query: 24  IPLYDALNKIQNEGVGIYDKNFIKSIELIKDRMKSNSSLTDAL--TGLIPDKEVLMINVA 81
           IPL +A+  +  +   ++ +N + S+   + ++    SL  A+  +G  PD  +  I   
Sbjct: 81  IPLEEAIRAVGKQSEKVHVQNLLMSV---RSKVLEGHSLAQAIQQSGRFPDLYIATIAAG 137

Query: 82  ENSGKISSGIAAIRKNIIDADEIKSKAISSMITPSVMLIVTMVVIAGYSVKVFPTFESVL 141
           E SG +   +  +     +   ++ K   +M+ P ++++++  ++ G    V P      
Sbjct: 138 ERSGHLDLILDQLADYTENRFAMQKKIQGAMVYPIILMLMSFAIVMGLMTYVVPDIVKTF 197

Query: 142 PVSRW--PGVTQALYNLGFSLYEGLWIKVLIFVAIFITILVFMSKNITGNFR-DGFLDKL 198
             S+   P +T  L      + +  W  +L+   + I +L+   K   G++  D F+ KL
Sbjct: 198 DQSKQALPAITVILMKTSDFIRQA-WPFLLVISVVGIMLLIRFLKTSAGHYTFDRFVLKL 256

Query: 199 PPFN-FVKHIAATEFLANMSMLLDSRVPFKEGLDIVDHKTTRWLSSHLQRMKA-NMQEGL 256
           P F    + I A  F + +S+L  S VP  + L I    +  W+      + A  + EG 
Sbjct: 257 PLFGKLARGINAARFASTLSILTRSGVPLVDALKIGAAVSNNWVIRDSVNLAAEKVTEGG 316

Query: 257 DYKQALDTNLLDKKMLLTMAVYSELPNFSD-VMQKLAIEANINLHKKIATLAGVMKNISL 315
           +    L+       M++ M    E     D ++++ +   +  +   I+TL  +++ + L
Sbjct: 317 NLATQLERAGYFPPMMVQMIRSGEASGELDRMLERASTMQDREVATFISTLLALLEPLML 376

Query: 316 ITLALSVIWIFGAI 329
           + +A  V+ I  A+
Sbjct: 377 VVMAGIVLVIVIAV 390