Pairwise Alignments

Query, 503 a.a., toxin coregulated pilus biosynthesis protein T from Vibrio cholerae E7946 ATCC 55056

Subject, 563 a.a., general secretion pathway protein GspE from Pseudomonas simiae WCS417

 Score =  131 bits (329), Expect = 7e-35
 Identities = 97/295 (32%), Positives = 152/295 (51%), Gaps = 21/295 (7%)

Query: 93  IASSATAYGASDIHFIREDRICKIKFRVNGTMIDYREILSSEADALMFVLYNVMATTKET 152
           I   A    ASDIH    +   K+++R++G + D     +S + A   V+  V    +  
Sbjct: 193 ILQRAVEQRASDIHIEPFENQLKVRYRIDGVLHDAEAPPASSSAA---VISRVKIMARLD 249

Query: 153 TWNRKLPQDANIILVINEKAYRFRYAHMPL-FGEGGKNYHAVVRIIYPSNNFVCTNYQDI 211
              R+LPQD  I+L I  K    R + +P  FGE       V+R++      V  ++  +
Sbjct: 250 IAERRLPQDGRIMLRIQGKELDLRVSTVPTSFGES-----VVLRLL--DRQTVQFDFPSL 302

Query: 212 GYNEADTDAIARILNTSYGLFIVSGTTGSGKSTSLKKYIELLFFNKYKGKGCFVTVEDPV 271
           G++     +   +L   +G+ +V+G TGSGK+T+L  Y  L   N  + K   +TVEDPV
Sbjct: 303 GFDGQRLASFLDLLERPHGILLVTGPTGSGKTTTL--YTALSRLNTTERK--IITVEDPV 358

Query: 272 EYLISGAQQSSIVADNDDKTKNPFADAVRSAMRRDPDVIMIGEIRDKPTVEALSSAVESG 331
           EY + G  Q  +           FA A+RS +R+DPDVIMIGEIRD  T      +  +G
Sbjct: 359 EYQLEGINQIQV----KPAIGLDFAGALRSIVRQDPDVIMIGEIRDLETCRIAIQSSLTG 414

Query: 332 HYCLTTIHAGSVVSVLQRLSGLGMKADKIASPGFLAGITSQKLIPELCPSCKVSF 386
           H  L+T+H  S  + + RL  +G+++  IAS   ++GI +Q+L+  L P  +V+F
Sbjct: 415 HLVLSTLHTNSAAASITRLMDMGVESYLIAST--VSGILAQRLVRRLDPVTRVAF 467