Pairwise Alignments

Query, 503 a.a., toxin coregulated pilus biosynthesis protein T from Vibrio cholerae E7946 ATCC 55056

Subject, 463 a.a., General secretion pathway protein E / Type II secretion cytoplasmic ATP binding protein (PulE, ATPase) from Variovorax sp. SCN45

 Score =  149 bits (377), Expect = 2e-40
 Identities = 106/365 (29%), Positives = 181/365 (49%), Gaps = 47/365 (12%)

Query: 93  IASSATAYGASDIHFIREDRICKIKFRVNGTMIDYREILSSEADALMFVLYNVMATTKET 152
           + + A   GASDIH    +R   ++FR++GT+   RE++         ++  +       
Sbjct: 115 LLTQAARDGASDIHIEPYERTSSVRFRIDGTL---REVVQPNRALHAALISRLKIMADLD 171

Query: 153 TWNRKLPQDANIILVINEKAYRFRYAHMPLFGEGGKNYHAVVRIIYPSNNFVCTNYQDIG 212
              ++LPQD  I L I  +A   R + +P          AV+R++  S + +    + +G
Sbjct: 172 ISEKRLPQDGRISLRIGTRAVDVRVSTLP----SAHGERAVLRLLDKSESKL--TLESVG 225

Query: 213 YNEADTDAIARILNTSYGLFIVSGTTGSGKSTSLKKYIELLFFNKYKGKGCFVTVEDPVE 272
                 D   ++++  +G+ +V+G TGSGK+T+L   +  L  ++       +TVEDP+E
Sbjct: 226 MQGDTLDRFEKLISQPHGIILVTGPTGSGKTTTLYAALARLDASRSN----IMTVEDPIE 281

Query: 273 YLISGAQQSSIVADNDDKTKNPFADAVRSAMRRDPDVIMIGEIRDKPTVEALSSAVESGH 332
           Y + G  Q+ I A    K +  FA A+R+ +R+DPDVIMIGEIRD  T +    A  +GH
Sbjct: 282 YELPGVGQTQINA----KIELTFAKALRAILRQDPDVIMIGEIRDFETAQIAIQASLTGH 337

Query: 333 YCLTTIHAGSVVSVLQRLSGLGMKADKIASPGFLAGITSQKLIPELCPSCKVSFVDERYQ 392
             L T+H    VS + RL+ +G++   ++S   L G+ +Q+L+ ++C +C  +       
Sbjct: 338 LVLATLHTNDSVSAVTRLTDMGVEPFLLSSS--LLGVLAQRLVRKVCTACAGA------- 388

Query: 393 RAVFSANENGCEACNHSGFKGRLLLLETLV--PTVEDLELVASENWVSLYRKYRERRFIK 450
                    GCE C  +G++GR  + E LV   TV+ L          ++ K  E   ++
Sbjct: 389 ---------GCEVCGQTGYQGRTGIFELLVADETVQGL----------IHSKAAESELLQ 429

Query: 451 TGKKG 455
            G +G
Sbjct: 430 AGARG 434