Pairwise Alignments

Query, 503 a.a., toxin coregulated pilus biosynthesis protein T from Vibrio cholerae E7946 ATCC 55056

Subject, 577 a.a., Type IV fimbrial assembly, ATPase PilB from Variovorax sp. SCN45

 Score =  134 bits (336), Expect = 1e-35
 Identities = 103/344 (29%), Positives = 168/344 (48%), Gaps = 35/344 (10%)

Query: 92  KIASSATAYGASDIHFIREDRICKIKFRVNGTMIDYREILSSEADALMFVLYNVMATTKE 151
           K+   A    ASDIHF   +   +++FRV+G +   REI S        +   +   ++ 
Sbjct: 200 KMLLDAVGMRASDIHFEPYEHNYRVRFRVDGEL---REIASPPTVIKDKLASRIKVISRL 256

Query: 152 TTWNRKLPQDANIILVIN-EKAYRFRYAHMP-LFGEGGKNYHAVVRIIYPSNNFVCTNYQ 209
               +++PQD  + L I  ++   FR + +P LFGE       VVRI+ PS+  +     
Sbjct: 257 DISEKRVPQDGRMKLKIGPDRVIDFRVSTLPTLFGE-----KIVVRILDPSSARL--GID 309

Query: 210 DIGYNEADTDAIARILNTSYGLFIVSGTTGSGKSTSLKKYIELLFFNKYKGKGCFVTVED 269
            +GY+  +   +   +   YG+ +V+G TGSGK+ SL   + LL      G     T ED
Sbjct: 310 ALGYDADEKARLLHAIGRPYGMVLVTGPTGSGKTVSLYTCLNLL---NQPGVN-IATAED 365

Query: 270 PVEYLISGAQQSSIVADNDDKTKNPFADAVRSAMRRDPDVIMIGEIRDKPTVEALSSAVE 329
           P E  + G  Q ++    +++    FA A+R+ +R+DPD+IM+GEIRD  T +    A +
Sbjct: 366 PSEINLPGVNQVNV----NERAGLTFAAALRAFLRQDPDIIMVGEIRDLETADISIKAAQ 421

Query: 330 SGHYCLTTIHAGSVVSVLQRLSGLGMKADKIASPGFLAGITSQKLIPELCPSCK------ 383
           +GH  L+T+H     + L R+  +G+    IAS   L  IT+Q+L   LC  C+      
Sbjct: 422 TGHLVLSTLHTNDAPTTLTRMRNMGIAPFNIASSVIL--ITAQRLARRLCTVCRAPADVP 479

Query: 384 ------VSFVDERYQRAVFSANENGCEACNHSGFKGRLLLLETL 421
                   F +E+   +       GC AC+  G+KGR+ + + +
Sbjct: 480 REALLDAGFQEEQLDGSWKPYRPVGCSACS-GGYKGRVGIYQVM 522