Pairwise Alignments

Query, 503 a.a., toxin coregulated pilus biosynthesis protein T from Vibrio cholerae E7946 ATCC 55056

Subject, 450 a.a., General secretion pathway protein E from Variovorax sp. SCN45

 Score =  134 bits (338), Expect = 5e-36
 Identities = 100/343 (29%), Positives = 171/343 (49%), Gaps = 22/343 (6%)

Query: 80  AKDLSFIEKDIMKIASSATAYGASDIHFIREDRICKIKFRVNGTMIDYREILSSEADALM 139
           A+D + + + I  + + A   GASDIH    +    +++RV+GT+   R++++       
Sbjct: 75  AQDDAPVIRMINALLAQAARDGASDIHLESFETHSVVRYRVDGTL---RDVVAPRKALHA 131

Query: 140 FVLYNVMATTKETTWNRKLPQDANIILVINEKAYRFRYAHMPLFGEGGKNYHAVVRIIYP 199
            ++  +   ++     ++LPQD  I L +  +    R + +P          AV+R++  
Sbjct: 132 ALISRIKIMSQLDIAEKRLPQDGRITLRVGGRPIDVRVSTVPT----AHGERAVLRLLEK 187

Query: 200 SNNFVCTNYQDIGYNEADTDAIARILNTSYGLFIVSGTTGSGKSTSLKKYIELLFFNKYK 259
               +    + +G        + R++   +G+ +V+G TGSGK+T+L   +  L  +   
Sbjct: 188 DAGRL--RLERLGMAPDTLAELTRLVRQPHGIVLVTGPTGSGKTTTLYAALGQLDLSTSN 245

Query: 260 GKGCFVTVEDPVEYLISGAQQSSIVADNDDKTKNPFADAVRSAMRRDPDVIMIGEIRDKP 319
                +TVEDPVEY + G  Q  +      K    F  A+R+A+R+DPD IMIGEIRD  
Sbjct: 246 ----ILTVEDPVEYDLPGIGQIPV----HGKIGMTFGAALRAALRQDPDNIMIGEIRDLE 297

Query: 320 TVEALSSAVESGHYCLTTIHAGSVVSVLQRLSGLGMKADKIASPGFLAGITSQKLIPELC 379
           T +    +  +GH  L ++H    VS + R++ +G++   ++S   L G+ +Q+L+  LC
Sbjct: 298 TAQIAVQSSLTGHGVLASLHTNDAVSAVTRMTDMGIEPFLLSSS--LLGVLAQRLVRCLC 355

Query: 380 PSCKVSFVDERYQRAVFSANENGCEACNHSGFKGRLLLLETLV 422
           P+CK      R   +V      GC AC HSGFKGR  + E  V
Sbjct: 356 PACKAP--QTRPDGSVV-YGPVGCAACGHSGFKGRTGIHELFV 395