Pairwise Alignments

Query, 503 a.a., toxin coregulated pilus biosynthesis protein T from Vibrio cholerae E7946 ATCC 55056

Subject, 562 a.a., type IV-A pilus assembly ATPase PilB from Vibrio cholerae E7946 ATCC 55056

 Score =  140 bits (352), Expect = 2e-37
 Identities = 107/366 (29%), Positives = 179/366 (48%), Gaps = 32/366 (8%)

Query: 77  EQQAKDLSFIEKDIMKIASSATAYGASDIHFIREDRICKIKFRVNGTMIDYREILSSEAD 136
           E  ++D S + + I ++   A   GASDIHF   +   +I+ R +G +++ ++  S  + 
Sbjct: 173 EDLSQDDSPVSRFINQVLLDAVRKGASDIHFEPYENQYRIRLRCDGILVETQQPASHLSR 232

Query: 137 ALMFVLYNVMATTKETTWNRKLPQDANIILVIN-EKAYRFRYAHMP-LFGEGGKNYHAVV 194
            L      +   +K     R+LPQD  I L ++ + A   R + +P L+GE       V+
Sbjct: 233 RLAA---RIKILSKLDIAERRLPQDGRIKLRLSRDTAIDMRVSTLPTLWGE-----KIVL 284

Query: 195 RIIYPSNNFVCTNYQDIGYNEADTDAIARILNTSYGLFIVSGTTGSGKSTSLKKYIELLF 254
           R++   ++    +   +GYN          L    G+ +++G TGSGK+ SL   + +L 
Sbjct: 285 RLL--DSSAANLDIDKLGYNPQQKQLYLNALKRPQGMILMTGPTGSGKTVSLYTGLRILN 342

Query: 255 FNKYKGKGCFVTVEDPVEYLISGAQQSSIVADNDDKTKNPFADAVRSAMRRDPDVIMIGE 314
            ++        T EDPVE  +SG  Q  +      K    FA+A+RS +R+DPDV+M+GE
Sbjct: 343 TSQIN----ISTAEDPVEINLSGINQVQV----QPKIGFGFAEALRSFLRQDPDVVMVGE 394

Query: 315 IRDKPTVEALSSAVESGHYCLTTIHAGSVVSVLQRLSGLGMKADKIASPGFLAGITSQKL 374
           IRD  T E    A ++GH  L+T+H  S    + RL+ +G++   +AS   L+ I +Q+L
Sbjct: 395 IRDLETAEIAVKAAQTGHLVLSTLHTNSAAETVIRLANMGVEPFNLASS--LSLIIAQRL 452

Query: 375 IPELCPSCKVSFVDERYQRAVFS---------ANENGCEACNHSGFKGRLLLLETLVPTV 425
              LC  CK++       ++ F+         AN  GC  C   G+ GR+ + E +    
Sbjct: 453 ARRLCKHCKIAVRPSALLQSQFAFQPNEILYEANAAGCNECT-GGYSGRVGIYEVMAFNT 511

Query: 426 EDLELV 431
           E  E +
Sbjct: 512 ELAEAI 517