Pairwise Alignments

Query, 503 a.a., toxin coregulated pilus biosynthesis protein T from Vibrio cholerae E7946 ATCC 55056

Subject, 513 a.a., General secretion pathway protein E from Sphingobium sp. HT1-2

 Score =  135 bits (340), Expect = 3e-36
 Identities = 97/336 (28%), Positives = 159/336 (47%), Gaps = 26/336 (7%)

Query: 93  IASSATAYGASDIHFIREDRICKIKFRVNGTMIDYREILSSEADALMFVLYNVMATTKET 152
           I + A   G SDIH    +    ++ RV+G +   RE L         V+  +    +  
Sbjct: 132 IIAEAARQGVSDIHIEPYETGLIVRMRVDGVL---RETLRMPPHVAPVVVSRIKVMARLD 188

Query: 153 TWNRKLPQDANIILVINEKAYRFRYAHMPLFGEGGKNYHAVVRIIYPSNNFVCTNYQDIG 212
              R++PQD  I L +  K    R + +P     G+    V+RI+   N  +  +   +G
Sbjct: 189 IAERRVPQDGRIGLTLGGKLLDVRVSTLP--SRAGER--VVLRILDKENAGITLDL--LG 242

Query: 213 YNEADTDAIARILNTSYGLFIVSGTTGSGKSTSLKKYIELLFFNKYKGKGCFVTVEDPVE 272
              A        L+   G+ +V+G TGSGK+T+L   +     N   G    +TVEDPVE
Sbjct: 243 MTGAPDRIFREGLSEPNGIILVTGPTGSGKTTTLYAGLR----NLNDGSRNILTVEDPVE 298

Query: 273 YLISGAQQSSIVADNDDKTKNPFADAVRSAMRRDPDVIMIGEIRDKPTVEALSSAVESGH 332
           Y + G  Q+ + A    K    FA  +R+ +R+DPDV+M+GEIRD+ T E    A  +GH
Sbjct: 299 YAMEGVGQTQVNA----KVGLTFAAGLRAILRQDPDVVMVGEIRDRETAEIAVQASLTGH 354

Query: 333 YCLTTIHAGSVVSVLQRLSGLGMKADKIASPGFLAGITSQKLIPELCPSCKVSFVDERYQ 392
             L+T+H    V  + R+  + ++   +AS   L  + +Q+L+  LC  C+     ++  
Sbjct: 355 LVLSTVHTNDAVGAITRMRDMRVEPFLLAST--LRAVVAQRLVRRLCQHCREPVQADKSA 412

Query: 393 RAVFSAN-------ENGCEACNHSGFKGRLLLLETL 421
            A+   +         GC+ CN +G+KGR+ + E +
Sbjct: 413 SALLGFDPGTIIYRARGCDECNGTGYKGRIGVFEAI 448