Pairwise Alignments

Query, 503 a.a., toxin coregulated pilus biosynthesis protein T from Vibrio cholerae E7946 ATCC 55056

Subject, 483 a.a., putative protein secretion protein for export from Pseudomonas putida KT2440

 Score =  129 bits (325), Expect = 2e-34
 Identities = 100/326 (30%), Positives = 162/326 (49%), Gaps = 28/326 (8%)

Query: 102 ASDIHFIREDRICKIKFRVNGTMIDYREILSSEADALMFVLYNVMATTKETTWNRKLPQD 161
           ASDIH    ++   ++ RV+G +   RE+L         ++  +    +     ++ PQD
Sbjct: 122 ASDIHIETFEQSLVVRLRVDGHL---REVLRPPRALSAMLVSRIKVMARLDIAEKRQPQD 178

Query: 162 ANIILVINEKAYRFRYAHMPLFGEGGKNYHAVVRIIYPSNNFVCTNYQDIGYNEADTDAI 221
             I L    +    R + +P    G      V+R++    + +  +  ++G   A    +
Sbjct: 179 GRITLRAAGREVDVRVSTLP----GIHGERVVMRVLDKQASLLALD--NLGMPAAVLQGL 232

Query: 222 ARILNTSYGLFIVSGTTGSGKSTSLKKYIELLFFNKYKGKGCFVTVEDPVEYLISGAQQS 281
              L    G+ + +G TGSGK+T+L  Y  L   N   G    +TVEDPVEY I+G  Q+
Sbjct: 233 RSCLARPNGIVLSTGPTGSGKTTTL--YASLNSLND--GSRNILTVEDPVEYAIAGIGQT 288

Query: 282 SIVADNDDKTKNPFADAVRSAMRRDPDVIMIGEIRDKPTVEALSSAVESGHYCLTTIHAG 341
           +I    + +    FA  +R+ +R+DPDVIM+GEIRD+ T +    A  +GH  L+T+H  
Sbjct: 289 AI----NPRAGLTFASGLRAILRQDPDVIMLGEIRDQETAQIAVQASLTGHLVLSTLHTN 344

Query: 342 SVVSVLQRLSGLGMKADKIASPGFLAGITSQKLIPELCPSCKVSFVDERYQRAVF----- 396
           + V  + RL  +G++   IAS   L G+ +Q+L+  LC SC V+   +  +R ++     
Sbjct: 345 NAVGAVTRLRDMGIEPFLIAS--CLRGVLAQRLVRRLC-SCAVAHPLQAAERELWPELAA 401

Query: 397 ---SANENGCEACNHSGFKGRLLLLE 419
              S +  GCE C  SG+ GRL L E
Sbjct: 402 LGCSYHAVGCEQCQGSGYIGRLGLYE 427