Pairwise Alignments

Query, 503 a.a., toxin coregulated pilus biosynthesis protein T from Vibrio cholerae E7946 ATCC 55056

Subject, 561 a.a., Predicted secretion system X protein GspE-like from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  140 bits (353), Expect = 1e-37
 Identities = 110/367 (29%), Positives = 171/367 (46%), Gaps = 30/367 (8%)

Query: 80  AKDLSFIEKDIMKIASSATAYGASDIHFIREDRICKIKFRVNGTMIDYREILSSEADALM 139
           ++D S + + +      A   GASDIH         IK+R++G +     I  SE    +
Sbjct: 170 SEDSSPVVRLVNSTLYDALKAGASDIHLETAGGGITIKYRIDGVLAGVGGIHGSENAEQV 229

Query: 140 FVLYNVMATTKETTWNRKLPQDANIILVINEKAYRFRYAHMP-LFGEGGKNYHAVVRIIY 198
                VMA        R++PQD    +    +A   R + MP + GE      AV+R++ 
Sbjct: 230 ISRIKVMAELDIA--ERRVPQDGRFKVAALGRAIDIRVSIMPSIHGED-----AVLRVLD 282

Query: 199 P---SNNFVCTNYQDIGYNEADTDAIARILNTSYGLFIVSGTTGSGKSTSLKKYIELLFF 255
               S+       + +G++     ++  +    YG+ + +G TGSGK+T+L   I  +  
Sbjct: 283 KERLSDQVTGLRLEALGFDAETMRSLRALCQEPYGMLLATGPTGSGKTTTLYAAINEI-- 340

Query: 256 NKYKGKGCFVTVEDPVEYLISGAQQSSIVADNDDKTKNPFADAVRSAMRRDPDVIMIGEI 315
               G    VT+EDPVEY ++G  Q  +    ++K    FA  +RS +R DPD IM+GEI
Sbjct: 341 --NHGHDKIVTIEDPVEYQLAGVLQIPV----NEKKGLTFARGLRSILRHDPDKIMVGEI 394

Query: 316 RDKPTVEALSSAVESGHYCLTTIHAGSVVSVLQRLSGLGMKADKIASPGFLAGITSQKLI 375
           RD  T +    A  +GH  LTT+HA +V  VL R + +G+  D  +    L GI +Q+L+
Sbjct: 395 RDGETAQIAVQAALTGHLVLTTVHANNVFDVLGRFTHMGV--DPYSLVAALNGIVAQRLV 452

Query: 376 PELCPSCKVSFVDERYQRAVFSANE---------NGCEACNHSGFKGRLLLLETLVPTVE 426
              CP C V  V      A     +          GC +C  +GFKGR  + E L+   E
Sbjct: 453 RVNCPDCAVDDVPTPELLADSGLRDVSGFHFRAGRGCASCRGTGFKGRKAVAEVLLLDDE 512

Query: 427 DLELVAS 433
             E++ +
Sbjct: 513 LREMIVT 519