Pairwise Alignments

Query, 503 a.a., toxin coregulated pilus biosynthesis protein T from Vibrio cholerae E7946 ATCC 55056

Subject, 564 a.a., Type IV fimbrial assembly, ATPase PilB from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  140 bits (352), Expect = 2e-37
 Identities = 112/387 (28%), Positives = 194/387 (50%), Gaps = 38/387 (9%)

Query: 60  FLVSDANHKLLIANLVTEQQAKDLSFIEKDIMKIASSATAYGASDIHFIREDRICKIKFR 119
           F   +A  +  ++++  +    D + + K + K+   A    ASD+HF   +   +++FR
Sbjct: 155 FEFDEAATETNVSDVTDKASEVDDAPVVKFLHKMLIDAFNMRASDLHFEPYEHNYRVRFR 214

Query: 120 VNGTMIDYREILSSEADALMFVLYNVMATTKETTWNRKLPQDANIILVIN-EKAYRFRYA 178
           V+G +   REI S        +   +   ++     +++PQD  + L I  ++   FR +
Sbjct: 215 VDGEL---REIASPPIVIKDKLASRIKVISRMDISEKRVPQDGRMKLKIGPDRVIDFRVS 271

Query: 179 HMP-LFGEGGKNYHAVVRIIYPSNNFVCTNYQDIGYNEADTDAIARILNTSYGLFIVSGT 237
            +P LFGE       V+RI+ PS+  V      +GY   + + +   +   YG+ +V+G 
Sbjct: 272 TLPTLFGE-----KIVIRILDPSSAKV--GIDALGYEPEEKERLLNAIGRPYGMVLVTGP 324

Query: 238 TGSGKSTSLKKYIELLFFNKYKGKGCFV-TVEDPVEYLISGAQQSSIVADNDDKTKNPFA 296
           TGSGK+ SL   + +L  NK    G  + T EDP E  + G  Q ++    ++K    FA
Sbjct: 325 TGSGKTVSLYTCLNIL--NK---PGINISTAEDPSEINLPGVNQVNV----NEKAGLTFA 375

Query: 297 DAVRSAMRRDPDVIMIGEIRDKPTVEALSSAVESGHYCLTTIHAGSVVSVLQRLSGLGMK 356
            A+++ +R+DPDVIM+GEIRD  T +    A ++GH  L+T+H     + L R+  +G+ 
Sbjct: 376 AALKAFLRQDPDVIMVGEIRDLETADISIKAAQTGHMVLSTLHTNDAPTTLTRMMNMGIP 435

Query: 357 ADKIASPGFLAGITSQKLIPELCPSCKV-------SFVDERYQRAVFSANEN-----GCE 404
              IAS   L  IT+Q+L   LC +CK        + VD  ++              GC 
Sbjct: 436 TFNIASSVIL--ITAQRLARRLCATCKAPLDAPRKALVDAGFKPEDLDGTWTPYKPVGCS 493

Query: 405 ACNHSGFKGRLLLLETLVPTVEDLELV 431
           ACN +G+KGR+ + + ++P  E+++ +
Sbjct: 494 ACN-NGYKGRVGIYQ-VMPISEEIQRI 518