Pairwise Alignments

Query, 503 a.a., toxin coregulated pilus biosynthesis protein T from Vibrio cholerae E7946 ATCC 55056

Subject, 570 a.a., type IV-A pilus assembly ATPase PilB from Kangiella aquimarina DSM 16071

 Score =  133 bits (335), Expect = 1e-35
 Identities = 105/359 (29%), Positives = 175/359 (48%), Gaps = 34/359 (9%)

Query: 86  IEKDIMKIASSATAYGASDIHFIREDRICKIKFRVNGTMIDYREILSSEADALMFVLYNV 145
           + K + ++  SA   GASD+HF   ++  +++FR++G +    E+ S        +   +
Sbjct: 188 VVKFVKQMLVSAIRKGASDLHFEPYEKKYRVRFRIDGML---HEVASPPVQLAGRISARL 244

Query: 146 MATTKETTWNRKLPQDANIILVINE-KAYRFRYAHMP-LFGEGGKNYHAVVRIIYPSNNF 203
              +      R++PQD  + L I++ KA  FR   +P LFGE       V+RI+ PS   
Sbjct: 245 KVLSGLDISERRVPQDGRVKLKISKTKAIDFRVNTLPTLFGE-----KIVMRILDPSQAM 299

Query: 204 VCTNYQDIGYNEADTDAIARILNTSYGLFIVSGTTGSGKSTSLKKYIELLFFNKYKGKGC 263
           +      +G++        R +    G+ +V+G TGSGK+ +L   + +L  ++YK    
Sbjct: 300 L--GIDALGFDPKQKKDFMRAIEKPQGMVLVTGPTGSGKTVTLYTGVNILN-DEYKN--- 353

Query: 264 FVTVEDPVEYLISGAQQSSIVADNDDKTKNPFADAVRSAMRRDPDVIMIGEIRDKPTVEA 323
             T EDPVE  + G  Q ++    + K    FA A+R+ +R+DPD++++GEIRD  T E 
Sbjct: 354 ISTAEDPVEINLHGINQVNV----NVKAGLTFASALRAFLRQDPDIVLVGEIRDLETAEI 409

Query: 324 LSSAVESGHYCLTTIHAGSVVSVLQRLSGLGMKADKIASPGFLAGITSQKLIPELCPSCK 383
              A ++GH  L+T+H  S    L RL  +G+    IA+   L  + +Q+L   LC  CK
Sbjct: 410 AIKAAQTGHLVLSTLHTNSAPETLTRLVNMGVAPFNIATTVNL--VVAQRLARRLCEHCK 467

Query: 384 --VSFVDERYQRAVFSANE---------NGCEACNHSGFKGRLLLLETLVPTVEDLELV 431
                  E      FS  E          GC+ C   G+KGR+ L + +  + E+  ++
Sbjct: 468 KPSDLPKEALLEEGFSEEELNELTIYEPVGCDKCT-MGYKGRVGLFQVMPVSEENGRII 525