Pairwise Alignments

Query, 503 a.a., toxin coregulated pilus biosynthesis protein T from Vibrio cholerae E7946 ATCC 55056

Subject, 492 a.a., type II secretion system protein E from Enterobacter asburiae PDN3

 Score =  159 bits (403), Expect = 2e-43
 Identities = 120/405 (29%), Positives = 201/405 (49%), Gaps = 40/405 (9%)

Query: 36  VLTLLEFDTKFRVNLLKKDKVYKYFLVSDANHKLLIANLVTEQQAKDLSFIEKD------ 89
           +LT   FD +   N+ +++      LV D +  + +  L TE+   +   ++ D      
Sbjct: 52  ILTAEAFD-ELLTNIWQQNSGVSQQLVDDMDADIDLMAL-TEEIPDNEDLLDNDENSPVI 109

Query: 90  --IMKIASSATAYGASDIHFIREDRICKIKFRVNGTMIDYREILSSEADALMFVLYNVMA 147
             I  I   A   GASDIH    +R   I+FRV+G +   R +L         ++  +  
Sbjct: 110 RLINAIMGEAVKEGASDIHIETFERTLSIRFRVDGVL---RPVLQPARKLAPLLVSRIKV 166

Query: 148 TTKETTWNRKLPQDANIILVINEKAYRFRYAHMPL-FGEGGKNYHAVVRIIYPSNNFVCT 206
            +K     ++LPQD  I L I  KA   R + +P  +GE       V+R++  SN  +  
Sbjct: 167 MSKLDIAEKRLPQDGRISLRIGRKAIDVRVSTIPSQYGE-----RVVMRLLDKSN--LKP 219

Query: 207 NYQDIGYNEADTDAIARILNTSYGLFIVSGTTGSGKSTSLKKYIELLFFNKYKGKGCFVT 266
           +   +G  + +   +  ++   +G+ +V+G TGSGKST+L  Y  L   N ++     +T
Sbjct: 220 DINKLGLIDEELVKLKGLIERPHGIILVTGPTGSGKSTTL--YALLSALNGHERN--ILT 275

Query: 267 VEDPVEYLISGAQQSSIVADNDDKTKNPFADAVRSAMRRDPDVIMIGEIRDKPTVEALSS 326
           VEDP+EY + G  Q+ +    + +    FA  +R+ +R+DPDV+MIGEIRD  T +    
Sbjct: 276 VEDPIEYELEGVGQTQV----NPRVDMTFARGLRAILRQDPDVVMIGEIRDGETAQIAVQ 331

Query: 327 AVESGHYCLTTIHAGSVVSVLQRLSGLGMKADKIASPGFLAGITSQKLIPELCPSCKVSF 386
           A  +GH  ++T+H  S    + RL  +G+++  I S   L G+ +Q+L+  LCP C+ + 
Sbjct: 332 ASLTGHLVMSTLHTNSAAGAITRLRDMGLESFLIGSS--LLGVIAQRLVRRLCPHCRTTS 389

Query: 387 VDERYQRAVFSANEN---------GCEACNHSGFKGRLLLLETLV 422
             +  ++A+F+  E          GCE C  SG++GR  + E LV
Sbjct: 390 PLDDNEKALFTFMETPPKAIYRAVGCEQCRQSGYQGRAGIHEFLV 434