Pairwise Alignments

Query, 503 a.a., toxin coregulated pilus biosynthesis protein T from Vibrio cholerae E7946 ATCC 55056

Subject, 473 a.a., type II secretion system protein GspE from Dickeya dianthicola ME23

 Score =  138 bits (348), Expect = 4e-37
 Identities = 110/343 (32%), Positives = 171/343 (49%), Gaps = 29/343 (8%)

Query: 102 ASDIHFIREDRICKIKFRVNGTMIDYREILSSEADALMFVLYNVMATTKETTWNRKLPQD 161
           ASDIHF       +++ R++G + +      S A  L+  L  +M   K     R+LPQD
Sbjct: 110 ASDIHFEPLPAGYRVRLRIDGVLHETPSAPDSLAGRLIARL-KIMG--KLNIAERRLPQD 166

Query: 162 ANIILVINEKAYRFRYAHMPLFGEGGKNYHAVVRIIYPSNNFVCTNYQDIGYNEADTDAI 221
               L +++ AY  R A +P+  +GG+    V+R++      +      +G         
Sbjct: 167 GQFSLRLDQHAYSLRIATLPV--QGGEK--VVLRVLQTQQQAL--ELDALGLPARALQQF 220

Query: 222 ARILNTSYGLFIVSGTTGSGKSTSLKKYIELLFFNKYKGKGCFVTVEDPVEYLISGAQQS 281
            + L+   GL +V+G TGSGK+ +L  Y  + + N      C  +VEDP+E  ++G  Q+
Sbjct: 221 KQALSLPQGLILVTGPTGSGKTFTL--YSAIRWLNDVSRNIC--SVEDPIEIPLAGINQT 276

Query: 282 SIVADNDDKTKNPFADAVRSAMRRDPDVIMIGEIRDKPTVEALSSAVESGHYCLTTIHAG 341
           +I A +    +  FA  +R+ +R+DPDVIMIGEIRD  T E    A ++GH  L+T+H  
Sbjct: 277 AIHAPS----QLDFARVLRALLRQDPDVIMIGEIRDAETAEIAVKAAQTGHLVLSTLHTN 332

Query: 342 SVVSVLQRLSGLGMKADKIASPGFLAGITSQKLIPELCPSCK------VSFVDERYQRAV 395
           S    L RL  LG+    +A+   L  + +Q+L+  LCP C+      V+  D  +Q  +
Sbjct: 333 SAADTLVRLGHLGIPGYLLAAA--LKLVIAQRLVRRLCPHCRQLTEDAVTLPDNLWQGPL 390

Query: 396 FSANENGCEACNHSGFKGRLLLLETLVPTVEDLE--LVASENW 436
                 GCE C  SG+ GR  L E L+P    L+  L  S +W
Sbjct: 391 RQWRATGCEHC-FSGYYGRAALYE-LLPVTPALQQALSGSASW 431