Pairwise Alignments

Query, 503 a.a., toxin coregulated pilus biosynthesis protein T from Vibrio cholerae E7946 ATCC 55056

Subject, 498 a.a., type II secretion system ATPase GspE from Dickeya dianthicola ME23

 Score =  162 bits (409), Expect = 3e-44
 Identities = 108/347 (31%), Positives = 182/347 (52%), Gaps = 31/347 (8%)

Query: 90  IMKIASSATAYGASDIHFIREDRICKIKFRVNGTMIDYREILSSEADALMFVLYNVMATT 149
           I  + + A  + ASDIH    +R   I+FR++G +   REIL  +      ++  +    
Sbjct: 124 INAMLTEAIKHKASDIHIETFERHLLIRFRIDGVL---REILRPQRQLASLLVSRIKVMA 180

Query: 150 KETTWNRKLPQDANIILVINEKAYRFRYAHMPLFGEGGKNYHAVVRIIYPSNNFVCTNYQ 209
           K     +++PQD  + L I  +A   R + +P       NY   V +     N V  + +
Sbjct: 181 KLDIAEKRVPQDGRMALRIGGRAIDVRVSTLP------SNYGERVVLRLLDKNSVRLDLE 234

Query: 210 DIGYNEADTDAIARILNTSYGLFIVSGTTGSGKSTSLKKYIELLFFNKYKGKGCFVTVED 269
            +G  E     +  +++  +G+ +V+G TGSGKST+L  Y  L   N  +     +TVED
Sbjct: 235 TLGMAEHHRRQVDTLIHRPHGIILVTGPTGSGKSTTL--YAALSRLNSAERN--IMTVED 290

Query: 270 PVEYLISGAQQSSIVADNDDKTKNPFADAVRSAMRRDPDVIMIGEIRDKPTVEALSSAVE 329
           P+EY + G  Q+ +    + K    FA  +R+ +R+DPDV+++GEIRD  T +    A  
Sbjct: 291 PIEYELEGIGQTQV----NPKVDMTFARGLRAILRQDPDVVLVGEIRDGETAQIAVQASL 346

Query: 330 SGHYCLTTIHAGSVVSVLQRLSGLGMKADKIASPGFLAGITSQKLIPELCPSCKVSFV-- 387
           +GH  L+T+H  S +  L RL  +G++   +++   L G+ +Q+L+  LCPSC+  +V  
Sbjct: 347 TGHLVLSTLHTNSALGALSRLQDMGIEPFLLSTS--LLGVLAQRLVRTLCPSCRQPYVID 404

Query: 388 DERYQRAVFSA-----NENGCEACNHSGFKGR-----LLLLETLVPT 424
           DE+ ++   +A     +  GCE CN+SG++GR     LLL++ +V T
Sbjct: 405 DEQAKQTGLAAGTTLYHPGGCEKCNYSGYRGRTGIHELLLIDDVVRT 451