Pairwise Alignments

Query, 503 a.a., toxin coregulated pilus biosynthesis protein T from Vibrio cholerae E7946 ATCC 55056

Subject, 752 a.a., Type II traffic warden ATPase from Alteromonas macleodii MIT1002

 Score =  133 bits (335), Expect = 2e-35
 Identities = 116/419 (27%), Positives = 188/419 (44%), Gaps = 54/419 (12%)

Query: 77  EQQAKDLSFIEKDIMKIASSATAYGASDIHFIREDRI-CKIKFRVNGTMIDYREILSSEA 135
           ++ + D   + + + +I   A    ASDIH   E     +++ RV+G   D  ++ +S  
Sbjct: 353 DELSDDAPAVVRLVSRILHDAKRLNASDIHIDPEKNAPTRVRMRVDGVCRDMNQVPNSHH 412

Query: 136 DALMFVLYNVMATTKETTWNRKLPQDANIILVINEKAYRFRYAHMP-LFGEGGKNYHAVV 194
            A   V+  +   +      +++PQD  +   +N +    R A +P + GEG      VV
Sbjct: 413 SA---VIARIKIMSNLNIAEKRVPQDGKLAFRMNGQLVEVRVATIPTVAGEG------VV 463

Query: 195 RIIYPSNNFVCTNYQDIGYNEADTDAIARILNTSYGLFIVSGTTGSGKSTSLKKYIELLF 254
             I  S   +  +  ++  N  +   +  ++   +G+ +V G TGSGK+T+L   +  L 
Sbjct: 464 MRILASGGAMPIDKMNLAPN--NRARLEEMIKKPHGILLVVGPTGSGKTTTLHAILGYLN 521

Query: 255 FNKYKGKGCFVTVEDPVEYLISGAQQSSIVADNDDKTKNPFADAVRSAMRRDPDVIMIGE 314
             + K      T EDPVE    G QQ  +      K    FA A+R+ +R DPD+I+IGE
Sbjct: 522 TPEKK----IWTAEDPVEITQPGLQQVQV----SPKIGFNFAAALRAFLRADPDIILIGE 573

Query: 315 IRDKPTVEALSSAVESGHYCLTTIHAGSVVSVLQRLSGLGMKADKIASPGFLAGITSQKL 374
           +RDK T  A   A  +GH  L+T+H  S    + RL  LG+  D +       GI +Q+L
Sbjct: 574 MRDKETAHAGIEASLTGHLVLSTLHTNSAPETITRLLDLGL--DPVNFSDACVGILAQRL 631

Query: 375 IPELCPSCK---------VSFVDERYQRAVFSA----------NENGCEACNHSGFKGRL 415
           I  LC SCK         ++F++ +Y  A  +              GCE C ++G+KGR 
Sbjct: 632 IRTLCSSCKEKYIATETDMAFIERQYGHAHMAELNIQTPLELYRAKGCEECGNTGYKGRT 691

Query: 416 LLLETLVPTVEDLELVASENWVSLYRKYRERRFIKTGKKGLGEGF-SIKDKAYYNVLKG 473
            + E L  T E   +V           Y+E        +   +G  ++   A + VLKG
Sbjct: 692 GVHELLGMTPELRSMV-----------YKEASVADMKSQAAADGMRTLVQDAIFKVLKG 739