Pairwise Alignments

Query, 503 a.a., toxin coregulated pilus biosynthesis protein T from Vibrio cholerae E7946 ATCC 55056

Subject, 495 a.a., Type II secretion system protein E from Acinetobacter radioresistens SK82

 Score =  147 bits (370), Expect = 1e-39
 Identities = 113/416 (27%), Positives = 195/416 (46%), Gaps = 46/416 (11%)

Query: 79  QAKDLSFIEKD------IMKIASSATAYGASDIHFIREDRICKIKFRVNGTMIDYREILS 132
           +A+DL   E D      I  + S A   GASDIH    ++   ++ RV+G +   REI+ 
Sbjct: 99  EAEDLMDQEDDAPIVRLINALLSEAIRVGASDIHIESFEKKLSVRLRVDGQL---REIVQ 155

Query: 133 SEADALMFVLYNVMATTKETTWNRKLPQDANIILVINEKAYRFRYAHMPLFGEGGKNYHA 192
              +    ++  +    +     +++PQD  I L +  +    R + +P           
Sbjct: 156 PRRELAPLLVSRIKVMARLDIAEKRIPQDGRISLRLAGREVDVRVSTLP----SSHGERV 211

Query: 193 VVRIIYPSNNFVCTNYQDIGYNEADTDAIARILNTSYGLFIVSGTTGSGKSTSLKKYIEL 252
           V+R++      +  N   +G    D + +  +++  +G+ +V+G TGSGK+T+L  Y  L
Sbjct: 212 VMRLLDKQAGRL--NMTHLGLIAEDYERLKTLVHRPHGIILVTGPTGSGKTTTL--YAAL 267

Query: 253 LFFNKYKGKGCFVTVEDPVEYLISGAQQSSIVADNDDKTKNPFADAVRSAMRRDPDVIMI 312
              N   G    +T EDP+EY + G  Q+ +    + K    FA A+++ +R+DPDV+M+
Sbjct: 268 SDLND--GSRNILTAEDPIEYQLEGIGQTQV----NTKVDMTFARALKAMLRQDPDVVMV 321

Query: 313 GEIRDKPTVEALSSAVESGHYCLTTIHAGSVVSVLQRLSGLGMKADKIASPGFLAGITSQ 372
           GEIRD  T E    A  +GH  L+T+H  + +  + RL  +G++   ++S   L G+ +Q
Sbjct: 322 GEIRDLETAEIAVQASLTGHLVLSTLHTNTAIGAVTRLKDMGIEPFLLSSS--LIGVVAQ 379

Query: 373 KLIPELCPSCKVSFVDERYQRAVFSANE----------NGCEACNHSGFKGRLLLLETLV 422
           +L+  LC  C      + +++ +F++ E           GCE C H+GF GR  + E +V
Sbjct: 380 RLVRTLCAHCVDWREADSFEQHIFNSFEQIEPVRLPVPKGCEYCAHTGFTGRTAIYE-IV 438

Query: 423 PTVEDLELVASENWVSLYRKYRERRFIKTGKKGLGEGFSIKDKAYYNVLKGKVCHE 478
           P  E +  +   N      +   RR             SI++     VL+GK   E
Sbjct: 439 PIDEQMRRLIHGNAAEYELENFARR----------HAGSIREDGLRKVLQGKTTLE 484