Pairwise Alignments

Query, 503 a.a., toxin coregulated pilus biosynthesis protein T from Vibrio cholerae E7946 ATCC 55056

Subject, 569 a.a., hypothetical protein from Acinetobacter radioresistens SK82

 Score =  137 bits (346), Expect = 8e-37
 Identities = 106/364 (29%), Positives = 174/364 (47%), Gaps = 36/364 (9%)

Query: 86  IEKDIMKIASSATAYGASDIHFIREDRICKIKFRVNGTMIDYREILSSEADALMFVLYNV 145
           I K I K+   A   GASD+HF   ++  ++++RV+G +   R++ +        +   +
Sbjct: 185 IVKYINKLLVDAIRIGASDLHFEPYEKYYRVRYRVDGVL---RQVATPPLQLATRLASRL 241

Query: 146 MATTKETTWNRKLPQDANIILVINE-KAYRFRYAHMP-LFGEGGKNYHAVVRIIYPSNNF 203
              ++     +++PQD  I L +++ KA  FR   +P LFGE       V+RI+ PS+  
Sbjct: 242 KVMSQMDISEKRVPQDGRIKLKLSKTKAIDFRVNSLPTLFGE-----KLVLRILDPSSAM 296

Query: 204 VCTNYQDIGYNEADTDAIARILNTSYGLFIVSGTTGSGKSTSLKKYIELLFFNKYKGKGC 263
           +      +GY           L    G+ +++G TGSGK+ SL  Y  L   N+      
Sbjct: 297 L--GIDALGYEPEQKALFIEALEKPQGMLLITGPTGSGKTVSL--YTGLNILNREDTN-- 350

Query: 264 FVTVEDPVEYLISGAQQSSIVADNDDKTKNPFADAVRSAMRRDPDVIMIGEIRDKPTVEA 323
             T EDPVE  + G  Q ++    ++K    F+ A++S +R+DPD+IM+GEIRD  T E 
Sbjct: 351 ISTAEDPVEINLEGINQVNV----NNKVGLSFSAALKSFLRQDPDIIMVGEIRDLETAEI 406

Query: 324 LSSAVESGHYCLTTIHAGSVVSVLQRLSGLGMKADKIASPGFLAGITSQKLIPELCPSCK 383
              A ++GH  ++T+H  S    L RL  +G+ A  IA+   L  + +Q+L   LC  CK
Sbjct: 407 AIKAAQTGHMVMSTLHTNSAPETLTRLRNMGVAAFNIATSVNL--VIAQRLARRLCNQCK 464

Query: 384 VSFVDERYQRAVFSANEN-------------GCEACNHSGFKGRLLLLETLVPTVEDLEL 430
           V     R         E+             GC  C   G++GR+ + E +  T E  ++
Sbjct: 465 VPAEIPRNSLLEMGFTEDDLAIPDFQVYQPVGCPEC-RDGYRGRVGIYEVMKVTPEISKI 523

Query: 431 VASE 434
           +  +
Sbjct: 524 IMED 527